Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC010627.1-201ENST00000503819 1294 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC016550.1-201ENST00000505348 785 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 HMGN1P15-201ENST00000513870 295 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC112206.4-201ENST00000515142 405 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 RN7SKP276-201ENST00000516242 268 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 BUD31P1-201ENST00000521828 359 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AP006289.1-201ENST00000538089 277 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC025260.1-201ENST00000548858 430 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC104229.1-201ENST00000561364 255 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC116553.2-201ENST00000564203 463 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC012254.4-201ENST00000588843 273 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AL391358.1-201ENST00000605342 190 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 MTCO1P4-201ENST00000520516 1409 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC092079.1-201ENST00000558620 1985 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC000123.3-201ENST00000624029 4975 ntBASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA3F8WFD2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 DDX18P4-201ENST00000511690 1966 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 RNA5SP505-201ENST00000364748 108 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 RNU6-317P-201ENST00000384031 107 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 RNU6-481P-201ENST00000384194 107 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 NCSTNP1-201ENST00000406229 144 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 RPL6P29-201ENST00000414863 865 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC119751.6-201ENST00000416712 186 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC012497.1-201ENST00000429392 575 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC092162.1-201ENST00000432828 434 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC092447.2-201ENST00000435487 669 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC073052.1-201ENST00000440417 714 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ELOCP10-201ENST00000440624 327 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC011753.3-201ENST00000443436 406 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AURKAPS2-201ENST00000454983 333 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 RPL23AP56-201ENST00000460778 453 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 RPL32P14-201ENST00000463196 378 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC104687.1-201ENST00000485829 412 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC111193.1-201ENST00000504097 155 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 OR5AK3P-201ENST00000527486 1297 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC234771.5-201ENST00000600161 514 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 PSMA6P4-201ENST00000603247 718 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 MTATP6P2-201ENST00000603319 678 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ELOCP34-201ENST00000604436 327 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC011374.2-201ENST00000607135 526 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC139769.3-201ENST00000618383 175 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AP000346.3-201ENST00000622821 210 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AL138960.2-201ENST00000625145 535 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC083865.1-201ENST00000636634 831 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC010329.2-201ENST00000595195 2737 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ZNF652P1-201ENST00000442420 1309 ntBASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 AC008432.1-201ENST00000615912 1320 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms