Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NEDD8-MDP1E9PL57 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RNU1-130P-201ENST00000363930 160 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 OR6C69P-201ENST00000394268 893 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC011933.1-201ENST00000413334 321 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RPS29P17-201ENST00000430795 166 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 PHBP16-201ENST00000446318 950 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RPL23AP43-201ENST00000446445 471 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 BUD31P2-201ENST00000449374 300 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RPL7P32-201ENST00000457119 744 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC116533.1-201ENST00000459748 321 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RN7SL303P-201ENST00000469773 251 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 LARP7P4-201ENST00000481075 878 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC020890.1-201ENST00000491837 504 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RPS27AP16-201ENST00000492222 470 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 HMGB3P16-201ENST00000508037 287 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RNA5SP464-201ENST00000516251 108 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 DUX4L52-201ENST00000549363 777 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC069366.1-201ENST00000583159 838 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 ADAD1P2-201ENST00000588476 646 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC130352.1-201ENST00000602979 661 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 MIR6716-201ENST00000613413 80 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC114781.5-201ENST00000615297 108 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC015871.5-202ENST00000623252 701 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 AC090017.1-201ENST00000548612 1779 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 CPHL1P-201ENST00000461341 3407 ntBASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NEDD8-MDP1E9PL57 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AC234781.4-201ENST00000419384 244 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RPL21P43-201ENST00000425440 472 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 OR2AH1P-201ENST00000425717 928 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RNF19BPX-201ENST00000426224 625 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 MTATP6P11-201ENST00000428071 670 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RPS3AP54-201ENST00000435535 734 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AL031584.1-201ENST00000447169 754 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AL591363.1-201ENST00000450091 483 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 CYCSP34-201ENST00000458172 304 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RN7SL98P-201ENST00000462271 300 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RPS27AP17-201ENST00000463344 455 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 TOMM20P2-201ENST00000540082 421 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AC015912.2-201ENST00000571053 181 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AP000843.1-201ENST00000624880 701 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 AL672167.1-205ENST00000641112 3080 ntBASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.61□□□□□ -1.67
NEDD8-MDP1E9PL57 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms