Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 ST13P16-201ENST00000401760 781 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 Z97832.1-201ENST00000402490 328 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 GJA6P-201ENST00000415117 1042 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 DDX39BP1-205ENST00000422507 192 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 HMGB3P21-201ENST00000452483 547 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 RPL23AP56-201ENST00000460778 453 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 RPL5P13-201ENST00000462840 709 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 RNU1-6P-201ENST00000516290 144 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 RNA5SP34-201ENST00000516887 130 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 DEFB109D-201ENST00000529497 240 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC007423.1-201ENST00000605009 627 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AL359513.1-201ENST00000614364 557 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC016957.2-201ENST00000616998 848 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AP002505.2-201ENST00000623585 696 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC007546.2-201ENST00000623996 360 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC136428.4-201ENST00000634254 1155 ntBASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RBFOX3A6NFN3 AC135352.1-201ENST00000506173 1418 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RNU6-532P-201ENST00000384318 107 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RNU1-89P-201ENST00000384592 164 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RNU1-82P-201ENST00000390851 165 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RNU4-34P-201ENST00000410431 124 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RN7SKP126-201ENST00000411143 300 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 CASKP1-201ENST00000412870 582 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC073464.3-201ENST00000422564 712 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AL645608.4-201ENST00000423619 154 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RWDD4P2-201ENST00000426392 563 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC073069.1-201ENST00000428657 441 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AL137845.2-201ENST00000444292 988 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 FCF1P7-201ENST00000451185 558 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AURKAPS1-201ENST00000451805 1212 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC079168.2-201ENST00000453977 416 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 ISCUP1-201ENST00000454451 448 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RN7SL172P-201ENST00000460535 303 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 EIF2S2P4-201ENST00000461070 984 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RPS18P6-201ENST00000476880 458 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RN7SL727P-201ENST00000482164 296 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 HMGN2P25-201ENST00000486956 268 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 RWDD4P1-201ENST00000488019 565 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC025554.1-201ENST00000505641 188 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 HIGD1AP14-201ENST00000507617 282 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC147055.3-201ENST00000510547 851 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC034244.2-201ENST00000514668 858 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AL049874.4-201ENST00000557593 255 ntBASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.53□□□□□ -1.84
RBFOX3A6NFN3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms