Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGC4Q9Y5F7 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGC4Q9Y5F7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGC4Q9Y5F7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 RBPJP6-201ENST00000411556 1431 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC025574.1-201ENST00000554784 1653 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC007012.2-201ENST00000623206 1676 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC023245.2-201ENST00000530760 2978 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 RNU6-1309P-201ENST00000363305 108 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL033519.1-201ENST00000407266 307 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL136133.1-201ENST00000413694 376 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC245054.2-201ENST00000415639 319 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL589794.1-201ENST00000424971 390 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 OR51AB1P-201ENST00000429046 620 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 RPEP2-201ENST00000432149 701 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL606489.2-201ENST00000433886 234 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 IFNA20P-201ENST00000436840 528 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 UBBP5-201ENST00000446970 266 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 MTND5P22-201ENST00000458380 195 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 MTCO2P29-201ENST00000465212 189 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC027575.1-201ENST00000481064 460 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC063943.2-201ENST00000495697 534 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 ARGFXP2-201ENST00000579304 949 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 MIR4503-201ENST00000582187 83 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC012175.1-201ENST00000603755 531 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL355472.4-201ENST00000610233 626 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AC093913.1-201ENST00000614178 329 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 MIR6503-201ENST00000622884 86 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC00561-201ENST00000565815 2738 ntBASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHGC4Q9Y5F7 AL592429.1-201ENST00000403909 1473 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 DBF4P1-201ENST00000412976 1892 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 RNU6-639P-201ENST00000384074 107 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORD94-201ENST00000386037 137 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AL929472.1-201ENST00000417484 429 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 MTATP6P18-201ENST00000417994 673 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AC092106.2-201ENST00000436597 487 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 RPEP4-201ENST00000437636 602 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 HMGB1P18-201ENST00000438801 619 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 UBE2V1P5-201ENST00000440070 405 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 TVP23CP1-201ENST00000450317 639 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 DHFRP3-201ENST00000455595 559 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 RPS27AP17-201ENST00000463344 455 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AC015524.1-201ENST00000491585 472 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 BTF3P13-201ENST00000513224 490 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 Y_RNA.691-201ENST00000516611 103 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORA48.10-201ENST00000516965 160 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 PDCD5P1-201ENST00000543528 309 ntBASIC6.67□□□□□ -1.34
PCDHGC4Q9Y5F7 SCOCP1-201ENST00000554676 349 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms