Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 VN1R82P-201ENST00000601481 356 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL451049.1-201ENST00000608672 497 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 Mico1.1-201ENST00000611698 204 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC007786.3-201ENST00000615154 596 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC090510.2-201ENST00000617465 629 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL360270.2-201ENST00000562952 5985 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AL445523.1-201ENST00000451184 1362 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC079097.1-201ENST00000512187 1399 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC068870.1-201ENST00000563737 2455 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AC005539.1-201ENST00000443768 1479 ntBASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB1Q9Y5F3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL049737.1-201ENST00000413920 1403 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 RSL24D1P4-201ENST00000400938 484 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 HSFY4P-201ENST00000415994 1181 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 SEPT2P1-201ENST00000419651 180 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MRPS36P1-201ENST00000421291 307 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL139421.1-201ENST00000423010 169 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC009784.1-201ENST00000426484 460 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 RPL7P4-203ENST00000430239 730 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MTCO3P21-201ENST00000430791 643 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ATP5F1P1-201ENST00000433775 569 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 CYCSP12-201ENST00000437729 300 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL354941.1-201ENST00000438600 464 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC073465.2-201ENST00000440938 498 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MTND3P1-201ENST00000441336 220 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ARL4AP3-201ENST00000441452 574 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 RPL21P134-201ENST00000453468 483 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 PNPLA4P1-201ENST00000458328 305 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 RPL7P39-201ENST00000481157 744 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC079841.1-201ENST00000481228 950 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 DYNLL1P6-201ENST00000503440 264 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 WBP1LP4-201ENST00000505043 344 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 XKRY-201ENST00000510392 1100 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC097486.1-201ENST00000515331 210 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC020937.1-201ENST00000519677 1013 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 HMGN2P6-201ENST00000551091 273 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MRPS21P7-201ENST00000566937 238 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC022069.1-201ENST00000582910 658 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 DUXAP11-201ENST00000603858 526 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC009220.3-201ENST00000604318 586 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AL451074.6-201ENST00000608512 729 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC122108.2-201ENST00000611946 526 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC011939.3-201ENST00000613686 466 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MIR6133-201ENST00000617057 108 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC096656.1-201ENST00000623826 1364 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC006206.1-201ENST00000544842 3387 ntBASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB1Q9Y5F3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms