Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CEACAMP1-201ENST00000434624 1035 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 RPS26P2-201ENST00000440331 348 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 ABCF2P2-201ENST00000450549 296 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 BNIP3P41-201ENST00000503774 571 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 CYCSP28-201ENST00000534284 321 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AC022655.2-201ENST00000577280 318 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 MIR3124-201ENST00000582636 67 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AC011471.1-201ENST00000585766 187 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AC005086.4-201ENST00000623065 213 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SHANK2Q9UPX8 AC092162.3-201ENST00000624511 1624 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 AC116667.1-201ENST00000604855 2072 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 RLIMP1-201ENST00000339626 1680 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 MIR634-201ENST00000385208 97 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 NDUFB4P4-201ENST00000404822 243 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 RN7SKP177-201ENST00000410567 355 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 RPL36AP13-201ENST00000457490 317 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 AC020978.9-201ENST00000624380 1141 ntBASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHANK2Q9UPX8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 OR11H4-201ENST00000315409 1082 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 RN7SKP186-201ENST00000365371 303 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 OR8F1P-201ENST00000425243 930 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 RPL23AP25-201ENST00000430973 463 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 SETP4-201ENST00000455717 868 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 LSM3P2-201ENST00000551246 273 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 AC015871.5-202ENST00000623252 701 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 CASC19-204ENST00000641001 2055 ntBASIC6.32□□□□□ -1.4
SHANK2Q9UPX8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 THAP12P5-201ENST00000405864 2275 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 AC108032.1-201ENST00000416706 207 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 AC112206.1-201ENST00000468416 477 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 RPL23AP65-201ENST00000475608 468 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 AF213884.1-201ENST00000488102 463 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 IFITM8P-201ENST00000522529 394 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 AC107016.1-201ENST00000550463 337 ntBASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHANK2Q9UPX8 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 RNA5SP22-201ENST00000365393 109 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 TCEA1P4-201ENST00000415066 844 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms