Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 TTC39DP-201ENST00000416781 1688 ntBASIC5.17□□□□□ -1.58
VPS4AQ9UN37 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.17□□□□□ -1.58
VPS4AQ9UN37 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 AC004817.4-201ENST00000602396 3625 ntBASIC5.17□□□□□ -1.58
VPS4AQ9UN37 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS4AQ9UN37 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC073055.1-201ENST00000456901 1621 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 GTF2H2B-203ENST00000508065 1432 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC008079.2-201ENST00000623543 20396 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 ENSAP3-201ENST00000312710 333 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RNA5SP305-201ENST00000362665 119 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RNA5SP234-201ENST00000363916 119 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 Y_RNA.578-201ENST00000390903 88 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 SNORA48.4-201ENST00000391089 134 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 BTF3P8-201ENST00000414577 526 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RPL19P16-201ENST00000433839 588 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC092170.1-201ENST00000440211 356 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 EEF1A1P39-201ENST00000440791 250 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 SETD6P1-201ENST00000444575 317 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 GYG1P1-201ENST00000460864 698 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RN7SL222P-201ENST00000476452 299 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RPL23AP44-201ENST00000482216 473 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC093267.1-201ENST00000489176 961 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 IGBP1P4-201ENST00000503202 879 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC098976.1-201ENST00000513014 541 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 SCARNA20.4-201ENST00000516969 131 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC008083.2-201ENST00000546707 476 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AP005403.1-201ENST00000579720 229 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AP000769.2-201ENST00000602344 396 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AL020997.3-201ENST00000602843 359 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AL135786.2-201ENST00000608422 615 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC126915.2-201ENST00000610957 190 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 VN1R7P-201ENST00000619242 903 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC013470.4-201ENST00000619978 986 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AP002505.2-201ENST00000623585 696 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 LINC02211-204ENST00000642024 1070 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.16□□□□□ -1.58
VPS4AQ9UN37 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4AQ9UN37 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS4AQ9UN37 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
VPS4AQ9UN37 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS4AQ9UN37 AC093311.1-201ENST00000506586 2021 ntBASIC5.15□□□□□ -1.58
VPS4AQ9UN37 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
VPS4AQ9UN37 RN7SKP6-201ENST00000364795 319 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 OR1L6-202ENST00000373684 1044 ntBASIC5.15□□□□□ -1.59
VPS4AQ9UN37 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms