Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AP001880.2-201ENST00000538233 448 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 RN7SL435P-201ENST00000584418 282 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC015911.5-201ENST00000587076 451 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC006363.1-201ENST00000603806 463 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL031320.1-201ENST00000604177 357 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL445528.2-201ENST00000620582 470 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC024595.1-201ENST00000623088 387 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC132825.7-201ENST00000638744 335 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC100871.1-201ENST00000507871 1456 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC017007.4-201ENST00000503353 1352 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 RNA5SP27-201ENST00000363839 119 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 RNU1-82P-201ENST00000390851 165 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AP002784.2-201ENST00000397300 549 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC234782.4-201ENST00000417646 1048 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 RPL36AP10-201ENST00000421785 322 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 DYNLL1P7-201ENST00000429273 258 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AL450263.2-201ENST00000439400 589 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 APOOP2-201ENST00000461561 539 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 RPS3AP41-201ENST00000462701 778 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC008379.1-201ENST00000463655 464 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 RPL23AP71-201ENST00000470966 469 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC069304.1-201ENST00000491593 704 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 TPT1P3-201ENST00000492841 512 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC068446.3-201ENST00000555285 382 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC084757.1-201ENST00000559987 490 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 NF1P5-201ENST00000588287 448 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 IMMP1LP1-201ENST00000605170 488 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AL021707.7-201ENST00000607991 416 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC112503.2-201ENST00000609005 552 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 MIR8069-1-201ENST00000616627 86 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 FRG1HP-204ENST00000617940 757 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 MIR8069-2-201ENST00000621412 86 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC016717.3-201ENST00000624730 554 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC080188.3-201ENST00000624842 748 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AL353743.4-201ENST00000422653 1547 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 AC131971.1-201ENST00000332881 1482 ntBASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
BLOC1S4Q9NUP1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL442639.1-201ENST00000625030 1899 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL445487.1-201ENST00000415694 1580 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 RNU1-83P-201ENST00000363426 164 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 RNU6-1005P-201ENST00000384519 107 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AL035419.1-201ENST00000397037 564 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AP000580.1-201ENST00000404439 358 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 ATF1P1-201ENST00000406040 927 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 RN7SKP100-201ENST00000411258 284 ntBASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.3□□□□□ -1.56
BLOC1S4Q9NUP1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms