Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 SSR1P1-201ENST00000407630 814 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 OR5BE1P-201ENST00000425977 939 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 PTMAP3-201ENST00000447474 330 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 RN7SL303P-201ENST00000469773 251 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 NPM1P41-201ENST00000512920 831 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 RNA5SP143-201ENST00000516936 115 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 OR7E10P-201ENST00000526420 991 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AL020997.2-201ENST00000602607 184 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AL121890.2-201ENST00000617644 465 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AC140113.4-201ENST00000622087 222 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AC090506.2-201ENST00000624521 419 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
KIAA1549Q9HCM3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
KIAA1549Q9HCM3 RPL32P23-201ENST00000397237 405 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC004448.2-201ENST00000422360 586 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 SERPINA7P1-201ENST00000443077 631 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 NPM1P29-201ENST00000483112 803 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 ATP1B1P1-201ENST00000509767 915 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC090151.1-201ENST00000520784 730 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 PHBP17-201ENST00000528576 541 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 SNORD91B-202ENST00000608459 222 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC241377.1-201ENST00000619797 406 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 MIR7702-201ENST00000621931 59 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AL138820.1-201ENST00000617901 5305 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AL355596.1-201ENST00000565399 3996 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 RNU1-14P-201ENST00000362759 152 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 RNU1-132P-201ENST00000364300 164 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 RNA5SP283-201ENST00000365604 119 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 EIF4A1P3-201ENST00000411521 244 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC009237.10-201ENST00000414112 510 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 RPL23AP38-201ENST00000423801 469 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 PSMB7P1-201ENST00000556349 514 ntBASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
KIAA1549Q9HCM3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC025750.1-201ENST00000399891 379 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms