Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 LINC02471-203ENST00000641941 4752 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 AL137100.1-201ENST00000556703 1620 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 AL136116.2-201ENST00000404020 785 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 RNA5SP345-201ENST00000410646 108 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 RANP7-201ENST00000418085 644 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 AL592293.2-201ENST00000422292 996 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 RGS17P1-201ENST00000423358 553 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 AL359073.1-201ENST00000448036 403 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 RBMY2TP-201ENST00000451162 947 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 RN7SL558P-201ENST00000497468 299 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 MTCO1P35-201ENST00000515270 228 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 RN7SKP276-201ENST00000516242 268 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 IGKV1-32-201ENST00000519290 311 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 AC007224.1-201ENST00000564410 144 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 AC069366.1-201ENST00000583159 838 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 CASC19-255ENST00000641733 1385 ntBASIC4.62□□□□□ -1.67
TRIM4Q9C037 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM4Q9C037 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM4Q9C037 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 Z97832.1-201ENST00000402490 328 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 RN7SKP100-201ENST00000411258 284 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AF186996.5-201ENST00000418098 904 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 OR51A6P-201ENST00000418680 1004 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL590609.2-201ENST00000421430 368 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL391219.1-201ENST00000422570 483 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL732292.1-201ENST00000426692 226 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL158073.1-201ENST00000426848 1104 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 RPL7P11-201ENST00000437586 658 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 CBX1P1-201ENST00000440184 427 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 Z95327.1-201ENST00000446082 482 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC010733.1-201ENST00000451515 401 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 OR52A4P-201ENST00000472867 958 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 RN7SL809P-201ENST00000482040 297 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC091167.1-201ENST00000492017 396 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 GAPDHP56-201ENST00000506031 988 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC100770.1-201ENST00000532310 322 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 NMNAT1P1-201ENST00000554095 876 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 MIR3939-201ENST00000582614 106 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 MIR6716-201ENST00000613413 80 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 AL133412.1-201ENST00000380194 2992 ntBASIC4.61□□□□□ -1.67
TRIM4Q9C037 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM4Q9C037 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM4Q9C037 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC008758.3-201ENST00000507003 1829 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM4Q9C037 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM4Q9C037 NAMPTP1-201ENST00000440465 2514 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 RNA5SP447-201ENST00000363749 119 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 RNU6-178P-201ENST00000384631 104 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 MIR513A2-201ENST00000385249 127 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms