Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 DEFB131D-201ENST00000526803 184 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 TPRX1P1-201ENST00000557620 319 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 CYCSP2-201ENST00000558168 301 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC002519.2-203ENST00000567043 837 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC074051.3-201ENST00000570238 358 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AL138895.2-201ENST00000603019 178 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC018816.2-201ENST00000621460 353 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AL359715.5-201ENST00000623431 443 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AC073488.6-201ENST00000632293 754 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 MTCO1P14-201ENST00000441695 1559 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AL137141.1-201ENST00000624622 4836 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 AP000756.2-201ENST00000624168 2567 ntBASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM55Q9BYV6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC004076.2-201ENST00000620532 3323 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AL034370.1-201ENST00000397254 1590 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AL121657.1-201ENST00000327215 531 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 RNU6-433P-201ENST00000363216 104 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 SUGT1P2-201ENST00000379452 992 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 FABP12P1-201ENST00000401911 322 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 TMBIM7P-201ENST00000418074 855 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 REREP1Y-201ENST00000422655 198 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AL953862.1-201ENST00000423016 168 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 RPS29P14-201ENST00000431518 171 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 MUPP-201ENST00000438111 566 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 MTND1P34-201ENST00000438556 671 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 REREP2Y-201ENST00000439103 200 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 TCEA1P3-201ENST00000443005 880 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 TRGVB-201ENST00000453257 471 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 RPL30P9-201ENST00000465586 330 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 RN7SL714P-201ENST00000487050 298 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC090071.1-201ENST00000507713 644 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 TPM3P3-201ENST00000521343 354 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC137768.1-201ENST00000549998 553 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC012360.2-201ENST00000609349 391 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AC068792.1-201ENST00000621354 417 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 LINC02495-203ENST00000636704 242 ntBASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM55Q9BYV6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 LINC00561-201ENST00000565815 2738 ntBASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM55Q9BYV6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms