Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC097461.1-201ENST00000568928 2821 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 MRRFP1-201ENST00000435941 1675 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 RNA5SP319-201ENST00000362768 119 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 RNU1-19P-201ENST00000363306 165 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 MTND4P22-201ENST00000413116 1169 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 OR51A3P-201ENST00000413596 924 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 MTCO1P54-201ENST00000430139 712 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL365396.1-201ENST00000430854 671 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 SUMO2P3-201ENST00000438311 288 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 PPIAP17-201ENST00000438507 471 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC073109.1-201ENST00000445066 978 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 HMGN1P36-201ENST00000446623 298 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 OR52E3P-201ENST00000452083 936 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 YWHAEP1-201ENST00000453697 763 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL133477.1-201ENST00000457472 514 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC092754.1-201ENST00000472975 479 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 RPL21P6-201ENST00000479171 504 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC108734.3-201ENST00000481241 1165 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL049874.2-201ENST00000492636 288 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 DYNLL1P6-201ENST00000503440 264 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 HMGB1P44-201ENST00000508597 572 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 RNU6-1129P-201ENST00000515964 104 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 RN7SKP283-201ENST00000517197 270 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC008562.1-201ENST00000521763 330 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AP000619.3-201ENST00000535634 1127 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC109446.2-201ENST00000567872 497 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 BNIP3P26-201ENST00000600827 554 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC027243.2-201ENST00000602530 724 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 Z99497.2-201ENST00000603634 310 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 FO393422.1-201ENST00000603908 708 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AL118522.2-201ENST00000616045 615 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC090246.1-201ENST00000616499 426 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC121761.2-201ENST00000617300 689 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 SAMMSON-213ENST00000641336 1521 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 AC100757.1-201ENST00000616872 1835 ntBASIC5.32□□□□□ -1.56
TRIM54Q9BYV2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 RNU5A-2P-201ENST00000384337 116 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 EI24P3-201ENST00000399046 1062 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 RN7SKP286-201ENST00000410894 299 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC009518.2-201ENST00000418056 731 ntBASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM54Q9BYV2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms