Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 AC140479.6-201ENST00000633535 357 ntBASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RPAP1Q9BWH6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
RPAP1Q9BWH6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RPAP1Q9BWH6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.34□□□□□ -1.56
RPAP1Q9BWH6 AC116158.1-201ENST00000560231 2129 ntBASIC5.34□□□□□ -1.56
RPAP1Q9BWH6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 RNU1-64P-201ENST00000365443 163 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 RNU6-167P-201ENST00000384292 106 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 MIR23B-201ENST00000384832 97 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 MIR3065-201ENST00000390137 79 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AMZ2P2-201ENST00000406819 1057 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP317-201ENST00000410176 116 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP311-201ENST00000411290 116 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 NPM1P26-201ENST00000426339 738 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 SKP1P3-201ENST00000429280 487 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC044797.1-201ENST00000445744 679 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC138409.2-202ENST00000507274 458 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC108475.1-201ENST00000507880 950 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 STMN1P2-201ENST00000508435 439 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP315-201ENST00000516340 116 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP312-201ENST00000517068 116 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AL008729.2-201ENST00000606393 473 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC091905.2-201ENST00000623143 306 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 NXPH1-205ENST00000602349 1953 ntBASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPAP1Q9BWH6 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 MIR383-201ENST00000362257 73 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP307-201ENST00000362863 116 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 RNU1-44P-201ENST00000384453 163 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AL022722.2-201ENST00000402519 180 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 EIF2S2P5-201ENST00000457635 968 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP497-201ENST00000516081 97 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC011270.1-201ENST00000558606 583 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC090515.3-201ENST00000560431 315 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 CCDC58P3-201ENST00000590792 430 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AC079298.2-201ENST00000623885 459 ntBASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RPAP1Q9BWH6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 AL121657.1-201ENST00000327215 531 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 EIF4EP1-201ENST00000422311 642 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 RPL23AP25-201ENST00000430973 463 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 OR4C10P-201ENST00000434991 931 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 AL359073.1-201ENST00000448036 403 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 RN7SL604P-201ENST00000492589 296 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 PPM1AP1-201ENST00000502740 1135 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 AC106785.1-201ENST00000565935 262 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 AC079587.1-201ENST00000603846 277 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms