Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL080312.1-201ENST00000256654 824 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 RNU6-490P-201ENST00000362985 107 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 RNU6-450P-201ENST00000364654 107 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL450124.1-201ENST00000376401 353 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 RNU6-33P-201ENST00000384793 107 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 PRELID1P2-201ENST00000407805 396 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL023807.1-201ENST00000407932 359 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL139135.1-201ENST00000412675 209 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC003071.2-201ENST00000423857 315 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC002553.1-201ENST00000442828 802 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 RPL21P133-201ENST00000443666 476 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 ATP5G1P6-201ENST00000451206 412 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC023194.2-201ENST00000465398 406 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 RN7SL89P-201ENST00000480252 283 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC008526.1-201ENST00000509149 338 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC108471.1-201ENST00000513977 287 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 RNU6-470P-201ENST00000515954 104 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 IGHV3-57-201ENST00000520143 280 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL137161.1-201ENST00000532231 390 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC125612.1-201ENST00000547580 377 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 SETP2-201ENST00000553886 926 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC006967.3-201ENST00000594086 1093 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 RN7SL715P-201ENST00000606972 286 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 MIR6829-201ENST00000620375 67 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 MIR8062-201ENST00000621515 85 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 U6.114-201ENST00000636407 96 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC007938.1-201ENST00000562524 2902 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.88□□□□□ -1.31
USB1Q9BQ65 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 AC108099.1-201ENST00000564402 3258 ntBASIC6.88□□□□□ -1.31
USB1Q9BQ65 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USB1Q9BQ65 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC008627.1-201ENST00000517511 1704 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AL117339.4-201ENST00000608335 7063 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC034111.1-201ENST00000562143 3770 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 RNU1-115P-201ENST00000365329 160 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 SNORA30-201ENST00000384028 129 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 MIR649-201ENST00000384843 97 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 U3.20-201ENST00000390909 217 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 RNA5SP297-201ENST00000391029 113 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 RPL6P29-201ENST00000414863 865 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC011753.4-201ENST00000417974 311 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms