Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC011933.2-201ENST00000578539 2790 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VRK1Q99986 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 RNU6-115P-201ENST00000364310 107 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 RN7SKP78-201ENST00000364711 318 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 PIGPP2-201ENST00000411569 458 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL096829.1-201ENST00000413677 457 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 FCF1P2-201ENST00000415284 583 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 Z99497.1-201ENST00000421282 135 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 BX276092.6-201ENST00000430476 250 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 AL354710.1-201ENST00000453641 246 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 MTCO3P16-201ENST00000454456 754 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 BX276092.8-201ENST00000455722 250 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC083795.1-201ENST00000491760 320 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC114781.3-201ENST00000512083 142 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 RPS27AP18-201ENST00000515536 459 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC027309.2-201ENST00000520566 192 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VRK1Q99986 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC092121.1-201ENST00000569452 202 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 NPIPB1P-202ENST00000588786 828 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 MIR132-201ENST00000591554 101 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.19□□□□□ -1.58
VRK1Q99986 WISP1-OT1-201ENST00000602893 642 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 PSMA6P4-201ENST00000603247 718 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC141002.1-201ENST00000607025 279 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AL354760.1-201ENST00000608357 643 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC008083.4-201ENST00000615076 444 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AL158063.1-201ENST00000615349 536 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 AL137067.2-201ENST00000621202 131 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC138965.3-201ENST00000623875 498 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC129915.3-201ENST00000634128 948 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC127502.3-201ENST00000636170 1206 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC099654.6-201ENST00000636487 512 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 AC087565.3-203ENST00000641018 837 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VRK1Q99986 AC008079.2-201ENST00000623543 20396 ntBASIC5.19□□□□□ -1.58
VRK1Q99986 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK1Q99986 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
VRK1Q99986 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK1Q99986 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.18□□□□□ -1.58
VRK1Q99986 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK1Q99986 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
VRK1Q99986 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VRK1Q99986 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VRK1Q99986 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.18□□□□□ -1.58
VRK1Q99986 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
VRK1Q99986 AL158152.1-201ENST00000602652 1435 ntBASIC5.18□□□□□ -1.58
VRK1Q99986 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK1Q99986 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.18□□□□□ -1.58
VRK1Q99986 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK1Q99986 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VRK1Q99986 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK1Q99986 RNA5SP477-201ENST00000362639 119 ntBASIC5.18□□□□□ -1.58
VRK1Q99986 Y_RNA.194-201ENST00000363985 102 ntBASIC5.18□□□□□ -1.58
VRK1Q99986 RN7SKP128-201ENST00000364270 303 ntBASIC5.18□□□□□ -1.58
VRK1Q99986 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK1Q99986 GAPDHP42-201ENST00000406848 981 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms