Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPL7P56-201ENST00000429441 717 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CYCSP12-201ENST00000437729 300 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 PTGES3P1-201ENST00000439531 483 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ELOCP10-201ENST00000440624 327 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL024509.2-201ENST00000493462 493 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 HMGB1P44-201ENST00000508597 572 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 MTND6P2-201ENST00000512226 524 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AP001317.1-201ENST00000531194 960 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL049779.2-201ENST00000553847 315 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RPS3AP4-201ENST00000555161 764 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC136619.2-201ENST00000563361 631 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092325.1-201ENST00000566449 554 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC011260.1-201ENST00000578420 472 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 OR4G1P-201ENST00000588632 938 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ELOCP28-201ENST00000590044 317 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 MTCO3P22-201ENST00000603219 784 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL031281.1-201ENST00000604049 488 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 IMMP1LP3-201ENST00000604197 224 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ELOCP34-201ENST00000604436 327 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AL139418.1-201ENST00000613613 177 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC013476.2-201ENST00000614456 459 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC010435.1-201ENST00000623353 1177 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC019080.5-201ENST00000624891 757 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AC074101.1-201ENST00000637861 241 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDK5RAP1Q96SZ6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF833P-201ENST00000424938 1494 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 Z83820.1-201ENST00000456978 1499 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 MTND4P23-201ENST00000447723 1363 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 U6.112-201ENST00000384129 70 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 MIR1286-201ENST00000408112 78 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 RPL7P30-201ENST00000420888 709 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 CFL1P1-202ENST00000432948 411 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 USP9YP35-201ENST00000435696 412 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02210-201ENST00000444561 288 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 VN1R34P-201ENST00000447387 883 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AL118496.2-201ENST00000448300 230 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC015864.1-201ENST00000496512 544 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 CBX3P3-201ENST00000508108 532 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AC027026.1-201ENST00000532323 742 ntBASIC5.73□□□□□ -1.49
CDK5RAP1Q96SZ6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms