Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.33□□□□□ -1.72
RFT1Q96AA3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RFT1Q96AA3 AL118496.1-201ENST00000440201 1812 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 SNORA73.1-201ENST00000363107 205 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 RNA5SP28-201ENST00000363841 119 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 RNU6-146P-201ENST00000384602 108 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 SNORA66-201ENST00000384792 133 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 HDGFP1-201ENST00000405943 252 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AL603766.1-201ENST00000407763 664 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 RN7SKP126-201ENST00000411143 300 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 RPL12P34-201ENST00000424532 479 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 ETF1P3-201ENST00000430422 1160 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 OR52E7P-201ENST00000452394 933 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AL121877.1-201ENST00000453704 622 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 SETP20-201ENST00000457046 852 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 RN7SL817P-201ENST00000480777 288 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC010350.1-201ENST00000504908 231 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 HMGN1P15-201ENST00000513870 295 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC079075.1-201ENST00000559543 878 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC124283.4-201ENST00000581815 456 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 VN1R84P-201ENST00000593697 235 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 FKBP1AP1-201ENST00000594588 318 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 RPL26P30-202ENST00000602923 645 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC100847.1-201ENST00000611316 481 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC123768.4-201ENST00000616244 701 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 U6.48-201ENST00000618523 106 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC026124.2-201ENST00000621847 656 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AL391262.2-201ENST00000622466 494 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC114546.3-201ENST00000623582 1734 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 AC018529.3-201ENST00000624212 2254 ntBASIC4.32□□□□□ -1.72
RFT1Q96AA3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.32□□□□□ -1.72
RFT1Q96AA3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFT1Q96AA3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFT1Q96AA3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFT1Q96AA3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFT1Q96AA3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 U3.2-201ENST00000362981 210 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 SNORA77-201ENST00000408716 125 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFT1Q96AA3 RN7SKP114-201ENST00000410327 279 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 BX664727.1-201ENST00000416024 466 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC004448.2-201ENST00000422360 586 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC073310.1-201ENST00000423226 1033 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFT1Q96AA3 MTCO1P43-201ENST00000431831 488 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC092162.1-201ENST00000432828 434 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 CFL1P1-202ENST00000432948 411 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC073052.1-201ENST00000440417 714 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.31□□□□□ -1.72
RFT1Q96AA3 TPMTP4-201ENST00000450749 678 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 PPIAP21-201ENST00000464473 501 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC015908.1-201ENST00000478739 476 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 UBA52P7-201ENST00000486088 380 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC104971.1-201ENST00000495117 578 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC108693.1-201ENST00000496068 432 ntBASIC4.31□□□□□ -1.72
RFT1Q96AA3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms