Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 DNAJB5P1-201ENST00000454004 806 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 BX248409.1-201ENST00000455497 255 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC004263.1-201ENST00000479327 332 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.75□□□□□ -1.49
HPS3Q969F9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 MTCO2P15-201ENST00000532655 656 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC023813.2-201ENST00000564321 469 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC008751.2-201ENST00000597885 980 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC097065.2-201ENST00000608159 533 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AP005432.2-201ENST00000608162 586 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.75□□□□□ -1.49
HPS3Q969F9 MIR6730-201ENST00000622213 67 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC079416.3-201ENST00000624479 549 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC092608.3-201ENST00000625017 386 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.75□□□□□ -1.49
HPS3Q969F9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.75□□□□□ -1.49
HPS3Q969F9 AL138820.1-201ENST00000617901 5305 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.75□□□□□ -1.49
HPS3Q969F9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.75□□□□□ -1.49
HPS3Q969F9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HPS3Q969F9 AC104446.1-201ENST00000613728 1321 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS3Q969F9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
HPS3Q969F9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 SNORA74A-201ENST00000364089 198 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 RNA5SP223-201ENST00000365174 120 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS3Q969F9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC107081.1-201ENST00000414975 361 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 OR52B5P-201ENST00000435337 951 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AL627308.1-201ENST00000435693 821 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 HMGB1P45-201ENST00000435986 653 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 RPL7AP61-201ENST00000443410 636 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 RPS26P30-201ENST00000443431 335 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC245028.2-201ENST00000458673 253 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC009127.1-201ENST00000467090 155 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AL035404.1-201ENST00000497982 568 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS3Q969F9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 BX510359.5-201ENST00000515651 304 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS3Q969F9 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS3Q969F9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AL390334.1-201ENST00000556395 450 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.74□□□□□ -1.49
HPS3Q969F9 NIFKP8-201ENST00000560500 874 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC145350.1-201ENST00000567426 208 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 MIR5708-201ENST00000579723 85 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 MIR4660-201ENST00000583549 74 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC015688.2-201ENST00000584523 262 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 VN1R83P-201ENST00000595685 445 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS3Q969F9 DUXAP3-201ENST00000603616 594 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 AC118658.2-201ENST00000618697 459 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 OR52B5P-202ENST00000641118 1110 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 ZNF876P-202ENST00000398732 1485 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC063976.2-201ENST00000425667 3556 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HPS3Q969F9 AC053481.2-202ENST00000582394 1500 ntBASIC5.74□□□□□ -1.49
HPS3Q969F9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HPS3Q969F9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HPS3Q969F9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
HPS3Q969F9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS3Q969F9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.73□□□□□ -1.49
HPS3Q969F9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS3Q969F9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS3Q969F9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS3Q969F9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS3Q969F9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS3Q969F9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HPS3Q969F9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS3Q969F9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms