Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 HMGB3P10-201ENST00000434734 572 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 YWHAZP2-201ENST00000440317 728 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AL357520.1-201ENST00000441557 453 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 UBA52P3-201ENST00000491303 382 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 IGHV3-63-201ENST00000518422 341 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 OR1AB1P-201ENST00000585564 761 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AC023813.4-201ENST00000607580 580 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AL161616.1-201ENST00000611867 286 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AC100827.5-201ENST00000615883 426 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AC067931.1-201ENST00000624190 671 ntBASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTN4IP1Q8WWV3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AL049697.2-201ENST00000403708 294 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RPL5P19-201ENST00000404228 893 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RPS12P10-201ENST00000427031 377 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 ELOCP18-201ENST00000434209 337 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RAB9AP5-201ENST00000437794 597 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RAB9AP2-201ENST00000443911 597 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AL162591.2-201ENST00000449634 317 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC012671.1-201ENST00000451912 203 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 OR7L1P-201ENST00000456181 380 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RNA5SP497-201ENST00000516081 97 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 UBTFL9-201ENST00000534504 1148 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 HMGB3P26-201ENST00000560051 582 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC124068.1-201ENST00000563131 678 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AL139395.1-201ENST00000603662 160 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 MIR6730-201ENST00000622213 67 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 AC016588.2-201ENST00000632484 3021 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 CPHL1P-201ENST00000461341 3407 ntBASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTN4IP1Q8WWV3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 AC093535.2-201ENST00000624769 2326 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 SNORA70F-201ENST00000384142 135 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 MIR1911-201ENST00000410783 80 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 AC098592.2-201ENST00000413158 265 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 RBMY2KP-201ENST00000418221 992 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 RPS12P5-201ENST00000423449 371 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 NANOGP6-201ENST00000429190 847 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 RPL23AP93-201ENST00000440847 484 ntBASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.67□□□□□ -1.82
RTN4IP1Q8WWV3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms