Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC010201.1-201ENST00000605051 540 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AL096803.3-201ENST00000609032 532 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 AC004825.2-201ENST00000616634 455 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 MIR6719-201ENST00000622428 87 ntBASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.31□□□□□ -1.72
CLHC1Q8NHS4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 Y_RNA.62-201ENST00000362840 99 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 MIR92A2-201ENST00000385299 75 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AL139039.2-201ENST00000407436 479 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC048351.1-201ENST00000420064 602 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CDY14P-201ENST00000431260 1014 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC069285.2-201ENST00000440210 275 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CDY12P-201ENST00000440679 1015 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CDY13P-201ENST00000445813 1015 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CDY23P-201ENST00000451661 1014 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CALM1P2-201ENST00000452941 448 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 HIGD1AP8-201ENST00000453927 274 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC021205.1-201ENST00000468797 348 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 OR5AN2P-201ENST00000534535 896 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 MIR4436B2-201ENST00000581415 91 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 MIR4436B1-201ENST00000583272 91 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC007423.1-201ENST00000605009 627 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC055839.1-201ENST00000634467 498 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 OR2L1P-202ENST00000641567 1023 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC138627.1-204ENST00000641894 765 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 AC007529.1-201ENST00000418574 2178 ntBASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.3□□□□□ -1.72
CLHC1Q8NHS4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 MTND4P26-201ENST00000415971 1359 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC067945.1-201ENST00000342609 618 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 RPS26P13-201ENST00000419030 330 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 RAD23BP1-201ENST00000421404 1227 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 CENPIP1-201ENST00000425713 902 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC093716.1-201ENST00000435923 377 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 RPL12P20-201ENST00000475538 479 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 RPL23AP65-201ENST00000475608 468 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 IGHV3-63-201ENST00000518422 341 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC100770.1-201ENST00000532310 322 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 UBE2FP2-201ENST00000566646 462 ntBASIC4.29□□□□□ -1.72
CLHC1Q8NHS4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms