Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 PPBPP1-201ENST00000510807 373 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC008694.2-201ENST00000517591 306 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 MYL12AP1-201ENST00000518490 515 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC133555.2-201ENST00000550213 292 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC073137.1-201ENST00000605636 634 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AL591926.8-201ENST00000616876 211 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC006213.5-201ENST00000619673 288 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 CASC19-284ENST00000642142 1868 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 MTND4P21-201ENST00000453886 1357 ntBASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC71LQ8N9Z2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RNU6-304P-201ENST00000364855 107 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RNU6-225P-201ENST00000384613 103 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 MIR320B1-201ENST00000390209 79 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AP002530.1-201ENST00000405705 684 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 FCF1P5-201ENST00000406490 482 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC002069.1-201ENST00000429649 1159 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RPS27AP15-201ENST00000447672 466 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 PPIAP19-201ENST00000486414 492 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC098799.3-201ENST00000506095 438 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RNA5SP446-201ENST00000515955 82 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RNU6-347P-201ENST00000516658 105 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 OR5AZ1P-201ENST00000527448 943 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC005363.1-201ENST00000530779 351 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 CKS1BP1-201ENST00000555221 240 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RN7SL802P-201ENST00000577858 299 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 MIR5699-201ENST00000578903 90 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC022884.3-201ENST00000579571 248 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 PSMA6P4-201ENST00000603247 718 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AP001521.2-201ENST00000608772 546 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC009318.3-201ENST00000616916 503 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC091905.2-201ENST00000623143 306 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AP003497.2-201ENST00000624220 967 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 AL359715.4-201ENST00000606629 1436 ntBASIC3.86□□□□□ -1.79
CCDC71LQ8N9Z2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 AC103591.2-201ENST00000265259 766 ntBASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 RNU6-666P-201ENST00000363499 107 ntBASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 SNORA62.2-201ENST00000364672 152 ntBASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 RNU1-44P-201ENST00000384453 163 ntBASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 AL031985.1-201ENST00000392713 418 ntBASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC71LQ8N9Z2 AL356057.1-202ENST00000402263 756 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms