Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 RAD23BP1-201ENST00000421404 1227 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 RPL7P28-201ENST00000437739 740 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 RPL12P3-201ENST00000440080 396 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC012671.1-201ENST00000451912 203 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 DDX39BP2-208ENST00000453923 258 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 HSPE1P22-201ENST00000456856 327 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC092905.1-201ENST00000467527 949 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 RPS26P15-201ENST00000488067 348 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AL592156.1-201ENST00000508758 304 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AP001922.4-201ENST00000526967 290 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 PCNPP1-201ENST00000552501 511 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 UBE2FP2-201ENST00000566646 462 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 SNORD39.2-201ENST00000579995 76 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AL160290.3-201ENST00000604869 165 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC010201.1-201ENST00000605051 540 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AL135786.2-201ENST00000608422 615 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC009704.2-201ENST00000618739 483 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AC233309.1-201ENST00000619522 751 ntBASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC50Q8IVM0 AL031985.3-201ENST00000565390 2449 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 OR10AB1P-202ENST00000641219 1686 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AC067945.1-201ENST00000342609 618 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 MIR105-2-201ENST00000385083 81 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AL078604.1-201ENST00000404609 466 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 JKAMPP1-201ENST00000413804 919 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 UBTFL3-201ENST00000418934 1024 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 RPS26P13-201ENST00000419030 330 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AL590762.4-201ENST00000425885 253 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 CDY14P-201ENST00000431260 1014 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 CDY12P-201ENST00000440679 1015 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 CDY13P-201ENST00000445813 1015 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 CDY23P-201ENST00000451661 1014 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 VN1R32P-201ENST00000452234 905 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 RPS27AP17-201ENST00000463344 455 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 UBTFL6-201ENST00000477929 1024 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 NPM1P6-201ENST00000521088 871 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 OR5M2P-201ENST00000529003 936 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 BRD9P1-201ENST00000529855 560 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 MIR4737-201ENST00000583979 81 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AC012213.4-201ENST00000606457 354 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 Z98200.1-201ENST00000607298 470 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AL359715.5-201ENST00000623431 443 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AC007546.2-201ENST00000623996 360 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 LINC00622-201ENST00000562811 1570 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 CPHL1P-201ENST00000461341 3407 ntBASIC4.68□□□□□ -1.66
CCDC50Q8IVM0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms