Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC71Q8IV32 AC107068.1-201ENST00000563286 4218 ntBASIC4.41□□□□□ -1.7
CCDC71Q8IV32 LINC01109-201ENST00000603837 3081 ntBASIC4.41□□□□□ -1.7
CCDC71Q8IV32 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71Q8IV32 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71Q8IV32 SPATA2P1-201ENST00000431223 2055 ntBASIC4.41□□□□□ -1.7
CCDC71Q8IV32 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC71Q8IV32 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71Q8IV32 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC71Q8IV32 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC71Q8IV32 Z98755.1-201ENST00000407015 1384 ntBASIC4.4□□□□□ -1.7
CCDC71Q8IV32 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC71Q8IV32 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC71Q8IV32 AL445487.1-201ENST00000415694 1580 ntBASIC4.4□□□□□ -1.7
CCDC71Q8IV32 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC71Q8IV32 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC71Q8IV32 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CCDC71Q8IV32 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC126755.2-208ENST00000327792 462 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC138969.1-213ENST00000331436 462 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 SNORD115-48-201ENST00000364764 76 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 RNU6-729P-201ENST00000384399 107 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 CYCSP10-201ENST00000417973 294 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 Z74021.1-201ENST00000423610 407 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 ZNF965P-201ENST00000432501 817 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 GSTA7P-201ENST00000438425 448 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC074367.1-201ENST00000438685 1125 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 XKRY2-201ENST00000442362 1093 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AL513533.1-201ENST00000453728 415 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 ATP5G1P3-201ENST00000463301 410 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC021087.2-201ENST00000504656 1203 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC034244.2-201ENST00000514668 858 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 RN7SKP276-201ENST00000516242 268 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 RNU6-709P-201ENST00000517257 104 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 NPM1P6-201ENST00000521088 871 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 C1GALT1P3-201ENST00000522049 819 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 ATP5J2P6-201ENST00000565203 266 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC019131.2-201ENST00000609071 870 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 CR589904.2-201ENST00000612533 440 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 EOGT-210ENST00000615922 1931 ntBASIC4.4□□□□□ -1.71
CCDC71Q8IV32 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC71Q8IV32 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 MFSD8-216ENST00000641147 4009 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 TLK1P1-201ENST00000456760 2440 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 RNA5SP372-201ENST00000390836 115 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 SNORA40.4-201ENST00000390971 128 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 RNA5SP332-201ENST00000391063 115 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 MIR298-201ENST00000401212 88 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 AL080315.1-201ENST00000406055 466 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 RNA5SP345-201ENST00000410646 108 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 RN7SKP100-201ENST00000411258 284 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 GTF2IP5-201ENST00000414608 731 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 AL357078.2-201ENST00000416486 427 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 P2RY10P2-201ENST00000416730 913 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 MTND4P24-201ENST00000424002 397 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 OR2B7P-201ENST00000429302 934 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 RPL17P35-201ENST00000432217 549 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 PPIAP13-201ENST00000434706 478 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 HMGB3P10-201ENST00000434734 572 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 MTCYBP29-201ENST00000436327 1006 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 RWDD4P1-201ENST00000488019 565 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 HMGB1P3-201ENST00000502802 616 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 HMGB3P13-201ENST00000511263 607 ntBASIC4.39□□□□□ -1.71
CCDC71Q8IV32 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC71Q8IV32 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms