Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 MRPS33P2-201ENST00000507850 322 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 BTF3P13-201ENST00000513224 490 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 RNU6-467P-201ENST00000517027 110 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 IGKV2-36-201ENST00000519999 223 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AL049830.4-201ENST00000555149 351 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC009117.1-201ENST00000563948 554 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 EIF1P5-201ENST00000585002 234 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AL031320.1-201ENST00000604177 357 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 CR392039.4-201ENST00000624968 501 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 SALL4P2-201ENST00000423288 2910 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 VN2R3P-201ENST00000422626 1412 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 AP000542.2-201ENST00000623199 6179 ntBASIC5.05□□□□□ -1.6
PRPF39Q86UA1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PRPF39Q86UA1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 BTBD10P1-201ENST00000549824 1352 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC090971.4-201ENST00000560291 1800 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RNU4-44P-201ENST00000363050 141 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RNA5SP87-201ENST00000384155 118 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RNU6-98P-201ENST00000384173 107 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MIR1303-201ENST00000408625 86 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 OR13Z1P-201ENST00000416141 834 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 TMBIM7P-201ENST00000418074 855 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RPL12P34-201ENST00000424532 479 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC012519.1-201ENST00000424588 610 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AL512661.1-201ENST00000434586 1253 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 H2AFZP6-201ENST00000444403 394 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RN7SL591P-201ENST00000496150 292 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MTCO2P9-201ENST00000503214 694 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RNA5SP249-201ENST00000516127 99 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 BGLT3-201ENST00000564523 994 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 CYCSP40-201ENST00000575927 294 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AC005377.1-201ENST00000605126 456 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 AP001521.2-201ENST00000608772 546 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 RMST_10.1-201ENST00000616309 154 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MIR8069-1-201ENST00000616627 86 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 MIR8069-2-201ENST00000621412 86 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 ECM1P2-201ENST00000503354 1577 ntBASIC5.04□□□□□ -1.6
PRPF39Q86UA1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF39Q86UA1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF39Q86UA1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms