Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AC063950.1-201ENST00000552036 308 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AC026464.5-201ENST00000562497 722 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 MIR4312-201ENST00000579909 76 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AP001330.4-201ENST00000604350 154 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-87P-201ENST00000607561 108 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 AC078899.5-201ENST00000612475 178 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 DBF4P1-201ENST00000412976 1892 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 MAPK10-344ENST00000641718 3746 ntBASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LYSMD3Q7Z3D4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC092447.10-201ENST00000620607 1652 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC095038.1-201ENST00000429248 1591 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 RNA5SP152-201ENST00000365184 110 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 MT-TP-201ENST00000387461 68 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 MIR1302-3-201ENST00000408128 138 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 MIR320C1-201ENST00000408566 88 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AL672212.1-201ENST00000422246 400 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 DPY19L1P2-201ENST00000426647 915 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 RPL23AP28-201ENST00000448062 470 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 HMGB3P15-201ENST00000507326 574 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC095057.1-201ENST00000507583 168 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 SNORA48.10-201ENST00000516965 160 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 HMGB1P23-201ENST00000518743 568 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC131935.1-201ENST00000524621 333 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AL591767.3-201ENST00000554632 525 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AC010287.1-201ENST00000566916 357 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 MRPS21P9-201ENST00000571150 257 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 U4.1-201ENST00000620349 87 ntBASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LYSMD3Q7Z3D4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
LYSMD3Q7Z3D4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
LYSMD3Q7Z3D4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
LYSMD3Q7Z3D4 RIOK3P1-201ENST00000418778 1528 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms