Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC097499.1-201ENST00000444277 208 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AL354714.3-201ENST00000447284 493 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 RPL7P55-201ENST00000450522 746 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 BX284632.1-201ENST00000478218 541 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 RPL30P11-201ENST00000495304 339 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 HMGB1P21-201ENST00000502313 581 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 COX6B1P5-201ENST00000509843 249 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC004980.4-201ENST00000513375 203 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC087763.1-201ENST00000603391 286 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC112503.2-201ENST00000609005 552 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC093799.2-201ENST00000610062 578 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 CDRT1-208ENST00000630868 794 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 OR14L1P-202ENST00000641545 3009 ntBASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP54Q7Z3B4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 OR4K17-201ENST00000315543 1032 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 SNORA66-201ENST00000384792 133 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 RNU6-1176P-201ENST00000390955 107 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL035405.1-201ENST00000400795 710 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 UBE2V1P11-201ENST00000411559 285 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 MTCO3P4-201ENST00000419236 787 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 DYNLL1P7-201ENST00000429273 258 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 FTH1P16-201ENST00000435241 552 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 GTF3AP5-201ENST00000442645 697 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 MRPL35P2-201ENST00000448009 511 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 CYCSP42-201ENST00000450823 238 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 RPL7AP6-201ENST00000477943 801 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC004453.1-201ENST00000487895 408 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 FTH1P24-201ENST00000503502 462 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 RN7SKP147-201ENST00000517154 244 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC105031.1-201ENST00000518550 476 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 RPL23AP53-201ENST00000521854 457 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AP003102.1-201ENST00000525638 661 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL121594.4-201ENST00000556211 1196 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC018618.2-201ENST00000604770 446 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC011374.2-201ENST00000607135 526 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC006946.3-201ENST00000609791 756 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 MIR7155-201ENST00000615925 56 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC018926.1-201ENST00000616335 435 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 MIR6719-201ENST00000622428 87 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC073869.10-201ENST00000642016 354 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 NEAT1-202ENST00000501122 22743 ntBASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUP54Q7Z3B4 AL445487.1-201ENST00000415694 1580 ntBASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.65□□□□□ -1.66
NUP54Q7Z3B4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms