Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CHRFAM7AQ494W8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRFAM7AQ494W8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRFAM7AQ494W8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 PNPT1P2-201ENST00000456768 2050 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 OR4K15-201ENST00000305051 1216 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 IGKV7-3-201ENST00000357453 298 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 RNA5SP191-201ENST00000362585 102 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 RNU6-1279P-201ENST00000383917 103 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AL136116.2-201ENST00000404020 785 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 RPL5P19-201ENST00000404228 893 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AL160275.2-201ENST00000412010 394 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 FABP7P1-201ENST00000424004 391 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 RPS6P12-201ENST00000432491 726 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AP000936.3-201ENST00000438127 255 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC093824.1-201ENST00000508796 343 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC093840.1-201ENST00000511599 336 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC018797.3-201ENST00000513388 1241 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 HMGB1P23-201ENST00000518743 568 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 DEFB109D-201ENST00000529497 240 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC084033.1-201ENST00000550830 633 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 MTND2P13-201ENST00000577438 1039 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 FAM106CP-201ENST00000582212 507 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 EIF1P5-201ENST00000585002 234 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC009303.3-201ENST00000591103 736 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AC007390.2-201ENST00000606229 3803 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AL672167.1-203ENST00000641299 2975 ntBASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRFAM7AQ494W8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AL080315.1-201ENST00000406055 466 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 CEACAMP8-201ENST00000413902 580 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 BX510359.2-201ENST00000417920 305 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 RPS27AP7-201ENST00000422792 455 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AC004975.1-201ENST00000428733 208 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 ARL4AP3-201ENST00000441452 574 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 TCEA1P1-201ENST00000449716 880 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 IGHV5-78-201ENST00000450948 295 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AC020898.1-201ENST00000474167 787 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AC105918.1-201ENST00000474399 838 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 RPS4XP18-201ENST00000495480 763 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 MYL12AP1-201ENST00000518490 515 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 SOX5P1-201ENST00000524155 1127 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AP001880.2-201ENST00000538233 448 ntBASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRFAM7AQ494W8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms