Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC073429.2-201ENST00000569694 1444 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 RNU4-40P-201ENST00000364351 143 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 SNORD116-2-201ENST00000384274 95 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 SNORD116-6-201ENST00000384711 96 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 RNGTTP1-201ENST00000420965 728 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AL139148.1-201ENST00000427122 680 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 MTND3P1-201ENST00000441336 220 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 ART2BP-201ENST00000453501 499 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 RPL7P39-201ENST00000481157 744 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 NDUFA5P12-201ENST00000503796 343 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC079395.1-201ENST00000510981 262 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC010486.3-201ENST00000511602 785 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 RNU6-1129P-201ENST00000515964 104 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AP001189.2-201ENST00000527320 189 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AL132657.2-201ENST00000564417 358 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AL353778.1-201ENST00000603149 408 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 HIRAP1-201ENST00000605318 787 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 AC018638.7-201ENST00000605836 1114 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 VIS1.1-201ENST00000610517 203 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCDC144BQ3MJ40 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AP000776.1-201ENST00000530032 1663 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RNA5SP30-201ENST00000365552 115 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 MIR223-201ENST00000385204 110 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AL133264.1-201ENST00000407157 562 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AL139098.1-201ENST00000407291 389 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RNA5SP80-201ENST00000410475 111 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RNU6-603P-201ENST00000411403 107 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC079809.1-201ENST00000415468 276 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RPL7L1P9-201ENST00000431298 745 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 YWHAZP7-201ENST00000436906 631 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 CNOT7P2-201ENST00000441051 832 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 EEF1B2P5-201ENST00000444820 548 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RN7SL172P-201ENST00000460535 303 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RN7SL51P-201ENST00000468230 285 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC090602.1-201ENST00000469695 252 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RPL7P18-201ENST00000478965 734 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 GAPDHP36-201ENST00000480688 918 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 GLUD1P3-202ENST00000508551 200 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 MRPS33P3-201ENST00000513456 322 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 RN7SKP96-201ENST00000516948 297 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 MTCO1P47-201ENST00000523889 1271 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 HAUS8P1-201ENST00000549005 542 ntBASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC144BQ3MJ40 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms