Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AP001804.2-201ENST00000533932 910 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AC233702.9-201ENST00000581528 203 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 RN7SL600P-201ENST00000581811 299 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AC006116.5-201ENST00000591936 559 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 BNIP3P33-201ENST00000598912 569 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 FAM27D1-201ENST00000612308 341 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 MIR8059-201ENST00000620427 81 ntBASIC5.21□□□□□ -1.58
RFX7Q2KHR2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX7Q2KHR2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 RNA5SP175-201ENST00000364275 119 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 MIR1179-201ENST00000408703 91 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 RN7SKP33-201ENST00000410942 340 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AL356968.2-201ENST00000412769 1257 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 CASKP1-201ENST00000412870 582 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 RBMY1KP-201ENST00000423480 476 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 EIF1P3-201ENST00000423841 334 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 EEF1A1P1-201ENST00000447052 739 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 RPL35AP15-201ENST00000468042 339 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 RPS26P28-201ENST00000470806 348 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 BNIP3P41-201ENST00000503774 571 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 PGBD4P4-201ENST00000509673 613 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AC010547.7-201ENST00000570323 333 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AP005262.1-201ENST00000582646 997 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AC005261.4-201ENST00000600047 1385 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AC090948.2-201ENST00000607363 564 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AC008013.2-202ENST00000637965 364 ntBASIC5.2□□□□□ -1.58
RFX7Q2KHR2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX7Q2KHR2 AC139713.2-215ENST00000641428 5037 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 RNU1-108P-201ENST00000362556 161 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 RN7SKP280-201ENST00000364196 304 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC025750.1-201ENST00000399891 379 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AL356095.1-201ENST00000417217 199 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AL512326.1-201ENST00000443050 721 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 GEMIN8P3-201ENST00000445417 720 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC044797.1-201ENST00000445744 679 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC079804.1-201ENST00000461922 436 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 RNA5SP73-201ENST00000516744 108 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 BNIP3P22-201ENST00000593399 556 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC023043.4-201ENST00000612081 449 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC090506.2-201ENST00000624521 419 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC092435.4-201ENST00000623012 4159 ntBASIC5.19□□□□□ -1.58
RFX7Q2KHR2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX7Q2KHR2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 MIR134-201ENST00000385258 73 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 SNORD66.1-201ENST00000391230 76 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 RAB9AP4-201ENST00000415230 609 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.18□□□□□ -1.58
RFX7Q2KHR2 HSFY6P-201ENST00000445573 403 ntBASIC5.18□□□□□ -1.58
RFX7Q2KHR2 SEPT7P3-201ENST00000455017 621 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms