Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SIX1Q15475 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX1Q15475 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX1Q15475 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SIX1Q15475 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX1Q15475 SNORA70F-201ENST00000384142 135 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SIX1Q15475 UBE2V1P15-201ENST00000407776 448 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 AC004690.1-201ENST00000418216 328 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX1Q15475 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
SIX1Q15475 AL360081.1-201ENST00000428299 555 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.52□□□□□ -1.69
SIX1Q15475 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 AL359265.2-201ENST00000434367 631 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 AL691517.1-201ENST00000440833 1235 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 RPL5P22-201ENST00000480199 884 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX1Q15475 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.52□□□□□ -1.69
SIX1Q15475 PCNAP1-201ENST00000505363 709 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 SETP12-201ENST00000514068 805 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 RNA5SP154-201ENST00000516193 111 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.52□□□□□ -1.69
SIX1Q15475 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX1Q15475 CR383656.6-201ENST00000550518 394 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX1Q15475 AP005119.2-201ENST00000579735 1105 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SIX1Q15475 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX1Q15475 AP001160.4-201ENST00000596971 382 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 FP325313.1-201ENST00000638228 703 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SIX1Q15475 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX1Q15475 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX1Q15475 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX1Q15475 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX1Q15475 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX1Q15475 BTBD10P1-201ENST00000549824 1352 ntBASIC4.52□□□□□ -1.69
SIX1Q15475 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SIX1Q15475 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX1Q15475 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 AP000542.2-201ENST00000623199 6179 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX1Q15475 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SIX1Q15475 AC008033.1-201ENST00000216407 1162 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 Y_RNA.110-201ENST00000363220 99 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 SNORD113.2-201ENST00000364166 89 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SIX1Q15475 CCNB2P1-201ENST00000399411 1150 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.51□□□□□ -1.69
SIX1Q15475 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX1Q15475 MTND4LP7-201ENST00000431728 294 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX1Q15475 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 DHFRP3-201ENST00000455595 559 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX1Q15475 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX1Q15475 RPS29P22-201ENST00000472363 168 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC007686.1-201ENST00000488511 463 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC104164.2-201ENST00000496953 495 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 ATP1B1P1-201ENST00000509767 915 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC108157.1-201ENST00000510511 539 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX1Q15475 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX1Q15475 RNA5SP228-201ENST00000516232 133 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AL352979.3-201ENST00000553515 247 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AL121839.1-201ENST00000556233 1185 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX1Q15475 AC021483.2-201ENST00000567415 758 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX1Q15475 AL139395.1-201ENST00000603662 160 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC079587.1-201ENST00000603846 277 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 QTRT1P1-201ENST00000604344 1078 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 HMGB1P51-201ENST00000605166 638 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC005014.3-201ENST00000605985 190 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC064801.1-201ENST00000612025 407 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 AC138907.10-201ENST00000623708 983 ntBASIC4.51□□□□□ -1.69
SIX1Q15475 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.51□□□□□ -1.69
SIX1Q15475 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX1Q15475 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX1Q15475 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX1Q15475 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms