Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PCDH1Q08174 OR11H4-201ENST00000315409 1082 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AL451142.1-201ENST00000375867 775 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AL590004.1-201ENST00000405321 300 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AL603766.1-201ENST00000407763 664 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 RPS6P23-201ENST00000413224 722 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 HMGB3P10-201ENST00000434734 572 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 SDCBPP1-201ENST00000440192 890 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDH1Q08174 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AKR1D1P1-201ENST00000457236 936 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 RN7SL83P-201ENST00000468131 297 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC128716.1-201ENST00000475129 166 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC106822.1-201ENST00000502647 526 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC025674.1-201ENST00000507074 324 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 SCARNA6.1-201ENST00000516989 238 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 RNU2-46P-201ENST00000517038 113 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDH1Q08174 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AL121579.2-201ENST00000555466 590 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AL391646.1-201ENST00000603860 190 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC011816.2-201ENST00000607089 556 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AP001521.1-201ENST00000609150 300 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AL080312.2-201ENST00000613001 630 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 U1.41-201ENST00000617626 165 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC027559.1-201ENST00000636288 271 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC135068.11-201ENST00000636378 921 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PCDH1Q08174 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AKAP17BP-201ENST00000431706 2719 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
PCDH1Q08174 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.4
PCDH1Q08174 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC090220.1-201ENST00000593078 1699 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC090017.1-201ENST00000548612 1779 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCDH1Q08174 Y_RNA.86-201ENST00000363020 111 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 RNU6-1227P-201ENST00000383981 107 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AL391419.1-201ENST00000398901 1275 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 RPL12P23-201ENST00000405880 490 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 MIR320C1-201ENST00000408566 88 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 SNRPEP10-201ENST00000420249 274 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AL589794.1-201ENST00000424971 390 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 CXCR2P1-202ENST00000443392 1074 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 SNX18P26-201ENST00000458433 740 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 RPL23AP71-201ENST00000470966 469 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC022730.1-201ENST00000473114 568 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDH1Q08174 MTND1P3-201ENST00000484956 952 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 RPL17P2-201ENST00000491913 451 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.27□□□□□ -1.41
PCDH1Q08174 RPL19P11-201ENST00000495944 589 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDH1Q08174 KLRA1P-201ENST00000503499 986 ntBASIC6.27□□□□□ -1.41
PCDH1Q08174 AC114324.2-202ENST00000503812 134 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms