Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 AC005294.1-201ENST00000355509 281 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 MIR133B-201ENST00000362210 119 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 RNU6-353P-201ENST00000364266 108 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 SNORA67-201ENST00000384423 137 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AL133388.1-201ENST00000404509 287 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 RN7SKP125-201ENST00000410481 302 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.86□□□□□ -1.63
RPS3AP61247 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 TAF13P2-201ENST00000416876 286 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 USP9YP21-201ENST00000420603 432 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 GAPDHP49-201ENST00000421421 961 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AL355433.1-201ENST00000422804 300 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.86□□□□□ -1.63
RPS3AP61247 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.86□□□□□ -1.63
RPS3AP61247 HMGB1P45-201ENST00000435986 653 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 MTND1P33-201ENST00000446251 917 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AC073587.1-201ENST00000447093 876 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.86□□□□□ -1.63
RPS3AP61247 AL445433.1-201ENST00000457507 257 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 snoU109.3-201ENST00000459477 145 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AC112206.1-201ENST00000468416 477 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AP000797.2-201ENST00000475768 606 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 RN7SL214P-201ENST00000487317 265 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 PRELID3BP6-201ENST00000503839 571 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.86□□□□□ -1.63
RPS3AP61247 RN7SKP157-201ENST00000516174 282 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 IGJP1-201ENST00000522682 475 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.86□□□□□ -1.63
RPS3AP61247 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.86□□□□□ -1.63
RPS3AP61247 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.86□□□□□ -1.63
RPS3AP61247 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.86□□□□□ -1.63
RPS3AP61247 BNIP3P40-201ENST00000596017 556 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AL022067.1-201ENST00000602426 454 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.86□□□□□ -1.63
RPS3AP61247 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 AC109583.2-201ENST00000617367 129 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 AC015804.1-201ENST00000622935 435 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AP000648.2-201ENST00000624182 404 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 AC010608.3-201ENST00000625048 527 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.86□□□□□ -1.63
RPS3AP61247 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.86□□□□□ -1.63
RPS3AP61247 BX649567.1-201ENST00000642071 1134 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RPS3AP61247 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 AC093535.2-201ENST00000624769 2326 ntBASIC4.86□□□□□ -1.63
RPS3AP61247 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPS3AP61247 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.86□□□□□ -1.63
RPS3AP61247 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPS3AP61247 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPS3AP61247 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPS3AP61247 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPS3AP61247 AL512646.1-201ENST00000269395 1077 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AC011155.1-201ENST00000316512 456 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.85□□□□□ -1.63
RPS3AP61247 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.85□□□□□ -1.63
RPS3AP61247 MIR223-201ENST00000385204 110 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.85□□□□□ -1.63
RPS3AP61247 AL390774.1-201ENST00000411924 246 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPS3AP61247 AL031736.2-201ENST00000426573 787 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.85□□□□□ -1.63
RPS3AP61247 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.85□□□□□ -1.63
RPS3AP61247 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.85□□□□□ -1.63
RPS3AP61247 TXNP5-201ENST00000441043 315 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AL163193.1-201ENST00000444895 788 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPS3AP61247 PTMAP3-201ENST00000447474 330 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 MRPL35P2-201ENST00000448009 511 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.85□□□□□ -1.63
RPS3AP61247 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RPS3AP61247 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.85□□□□□ -1.63
RPS3AP61247 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.85□□□□□ -1.63
RPS3AP61247 AC010683.1-201ENST00000473673 378 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AC091959.2-201ENST00000477363 321 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 RPS12P31-201ENST00000491419 398 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 RPS4XP14-201ENST00000493072 781 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.85□□□□□ -1.63
RPS3AP61247 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.85□□□□□ -1.63
RPS3AP61247 AC104417.1-201ENST00000523974 751 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 OR8I1P-201ENST00000529291 931 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RPS3AP61247 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.85□□□□□ -1.63
RPS3AP61247 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.85□□□□□ -1.63
RPS3AP61247 MTCO1P40-201ENST00000574371 625 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 MIR4716-201ENST00000579628 84 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.85□□□□□ -1.63
RPS3AP61247 AP000769.2-201ENST00000602344 396 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AC069431.2-201ENST00000604149 1099 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 Z82195.1-201ENST00000604558 398 ntBASIC4.85□□□□□ -1.63
RPS3AP61247 AC090948.2-201ENST00000607363 564 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms