Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.15□□□□□ -1.58
CLRN1P58418 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.15□□□□□ -1.58
CLRN1P58418 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.15□□□□□ -1.58
CLRN1P58418 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CLRN1P58418 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.15□□□□□ -1.58
CLRN1P58418 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CLRN1P58418 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLRN1P58418 RNU6-582P-201ENST00000362989 107 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 RNU6-374P-201ENST00000364146 108 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 SUGT1P2-201ENST00000379452 992 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLRN1P58418 Y_RNA.516-201ENST00000384541 124 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 RNY3P10-201ENST00000384764 102 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 U3.28-201ENST00000391249 210 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 RN7SKP29-201ENST00000410957 272 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 FCF1P9-201ENST00000412546 282 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AL354890.1-201ENST00000413730 346 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AC004448.2-201ENST00000422360 586 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 RPL23AP19-201ENST00000436229 369 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 MTND1P1-201ENST00000445453 368 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AC093166.4-201ENST00000457867 318 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 RN7SL170P-201ENST00000487098 295 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 RPL7P38-201ENST00000488396 739 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 PDCL3P4-201ENST00000489621 720 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLRN1P58418 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AP001207.1-201ENST00000524051 481 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
CLRN1P58418 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.15□□□□□ -1.59
CLRN1P58418 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.15□□□□□ -1.59
CLRN1P58418 OR6C7P-201ENST00000547875 934 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC004217.3-201ENST00000551552 878 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.15□□□□□ -1.59
CLRN1P58418 AC091078.2-201ENST00000557145 559 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC138915.2-201ENST00000569776 97 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC067773.1-201ENST00000603284 1094 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC012360.2-201ENST00000609349 391 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC068944.2-201ENST00000610373 403 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 Z99129.1-201ENST00000612510 255 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC124312.6-202ENST00000623624 418 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 MKKS-204ENST00000639674 192 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 LINC01739-205ENST00000641890 573 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLRN1P58418 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLRN1P58418 AC107982.1-201ENST00000507171 1300 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.15□□□□□ -1.59
CLRN1P58418 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 MFSD8-239ENST00000641590 2479 ntBASIC5.15□□□□□ -1.59
CLRN1P58418 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CLRN1P58418 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.15□□□□□ -1.59
CLRN1P58418 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.14□□□□□ -1.59
CLRN1P58418 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLRN1P58418 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 Y_RNA.6-201ENST00000362350 114 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 Y_RNA.41-201ENST00000362646 102 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 RNA5SP433-201ENST00000364491 114 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 Y_RNA.302-201ENST00000364997 102 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLRN1P58418 RNA5SP91-201ENST00000390902 119 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLRN1P58418 OR2W4P-201ENST00000406496 926 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.14□□□□□ -1.59
CLRN1P58418 AL513175.1-201ENST00000431492 780 ntBASIC5.14□□□□□ -1.59
CLRN1P58418 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.14□□□□□ -1.59
CLRN1P58418 AC242426.1-201ENST00000435270 960 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms