Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CASP6P55212 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.89□□□□□ -1.63
CASP6P55212 AC008079.2-201ENST00000623543 20396 ntBASIC4.89□□□□□ -1.63
CASP6P55212 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.89□□□□□ -1.63
CASP6P55212 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP6P55212 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP6P55212 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.88□□□□□ -1.63
CASP6P55212 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP6P55212 RNA5SP391-201ENST00000363456 119 ntBASIC4.88□□□□□ -1.63
CASP6P55212 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CASP6P55212 OR1L1-202ENST00000373686 1083 ntBASIC4.88□□□□□ -1.63
CASP6P55212 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP6P55212 MTCO1P56-201ENST00000401674 224 ntBASIC4.88□□□□□ -1.63
CASP6P55212 TMSB4XP8-201ENST00000402089 135 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AL133388.1-201ENST00000404509 287 ntBASIC4.88□□□□□ -1.63
CASP6P55212 ZNF602P-201ENST00000405929 924 ntBASIC4.88□□□□□ -1.63
CASP6P55212 DUTP5-201ENST00000406790 469 ntBASIC4.88□□□□□ -1.63
CASP6P55212 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP6P55212 TMSB4XP6-201ENST00000415187 135 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC106883.1-201ENST00000418805 562 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP6P55212 SFR1P2-201ENST00000421841 730 ntBASIC4.88□□□□□ -1.63
CASP6P55212 TMSB4XP1-201ENST00000424567 135 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AL590762.4-201ENST00000425885 253 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 MTCYBP42-201ENST00000444653 1130 ntBASIC4.88□□□□□ -1.63
CASP6P55212 RPS27AP15-201ENST00000447672 466 ntBASIC4.88□□□□□ -1.63
CASP6P55212 RPL23AP15-201ENST00000450202 459 ntBASIC4.88□□□□□ -1.63
CASP6P55212 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP6P55212 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP6P55212 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP6P55212 RPS12P31-201ENST00000491419 398 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP6P55212 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP6P55212 HIGD1AP5-201ENST00000529959 259 ntBASIC4.88□□□□□ -1.63
CASP6P55212 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 CR383656.6-201ENST00000550518 394 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP6P55212 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.88□□□□□ -1.63
CASP6P55212 AC027455.1-201ENST00000574104 594 ntBASIC4.88□□□□□ -1.63
CASP6P55212 MIR4509-3-201ENST00000578671 94 ntBASIC4.88□□□□□ -1.63
CASP6P55212 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP6P55212 MIR4509-2-201ENST00000583920 94 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 AC090330.1-201ENST00000588646 764 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP6P55212 AC005084.1-201ENST00000605160 304 ntBASIC4.88□□□□□ -1.63
CASP6P55212 HIRAP1-201ENST00000605318 787 ntBASIC4.88□□□□□ -1.63
CASP6P55212 MIR6864-201ENST00000617935 70 ntBASIC4.88□□□□□ -1.63
CASP6P55212 MIR4509-1-201ENST00000618224 94 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CASP6P55212 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP6P55212 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP6P55212 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
CASP6P55212 OR55B1P-203ENST00000641518 2602 ntBASIC4.88□□□□□ -1.63
CASP6P55212 AL049555.1-201ENST00000562834 1933 ntBASIC4.87□□□□□ -1.63
CASP6P55212 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.87□□□□□ -1.63
CASP6P55212 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP6P55212 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CASP6P55212 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP6P55212 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.87□□□□□ -1.63
CASP6P55212 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP6P55212 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP6P55212 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CASP6P55212 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CASP6P55212 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.87□□□□□ -1.63
CASP6P55212 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CASP6P55212 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.87□□□□□ -1.63
CASP6P55212 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CASP6P55212 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CASP6P55212 RNA5SP91-201ENST00000390902 119 ntBASIC4.87□□□□□ -1.63
CASP6P55212 Y_RNA.578-201ENST00000390903 88 ntBASIC4.87□□□□□ -1.63
CASP6P55212 RN7SKP126-201ENST00000411143 300 ntBASIC4.87□□□□□ -1.63
CASP6P55212 Y_RNA.625-201ENST00000411256 107 ntBASIC4.87□□□□□ -1.63
CASP6P55212 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.87□□□□□ -1.63
CASP6P55212 SRSF1P1-201ENST00000424058 520 ntBASIC4.87□□□□□ -1.63
CASP6P55212 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.87□□□□□ -1.63
CASP6P55212 NANOGP9-201ENST00000439890 892 ntBASIC4.87□□□□□ -1.63
CASP6P55212 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.87□□□□□ -1.63
CASP6P55212 MTCO1P53-201ENST00000441633 699 ntBASIC4.87□□□□□ -1.63
CASP6P55212 GAPDHP25-201ENST00000447061 1001 ntBASIC4.87□□□□□ -1.63
CASP6P55212 RHEBP2-201ENST00000450289 600 ntBASIC4.87□□□□□ -1.63
CASP6P55212 TVP23BP2-201ENST00000455082 615 ntBASIC4.87□□□□□ -1.63
CASP6P55212 RPL35AP28-201ENST00000459730 331 ntBASIC4.87□□□□□ -1.63
CASP6P55212 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CASP6P55212 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms