Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC107980.1-201ENST00000558671 3355 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.64□□□□□ -1.35
EPHA4P54764 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 RNU6-984P-201ENST00000363236 109 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RNU6-108P-201ENST00000365558 107 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 SNORA4.3-201ENST00000365564 137 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 Y_RNA.387-201ENST00000383918 102 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RNU6-1160P-201ENST00000384546 104 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 U3.23-201ENST00000391132 200 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 SNORA75.4-201ENST00000391278 119 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC244452.1-201ENST00000413798 141 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RPL35AP24-201ENST00000413846 330 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC004987.3-201ENST00000413879 771 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC019097.1-201ENST00000424783 735 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHA4P54764 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHA4P54764 GPR143P-201ENST00000434155 205 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC083855.1-201ENST00000440041 258 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 GAPDHP20-201ENST00000444107 1007 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 RPL7P22-201ENST00000466005 733 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RN7SL216P-201ENST00000471607 298 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RN7SL70P-201ENST00000478322 302 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RPS3AP50-201ENST00000487064 803 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RPS4XP23-201ENST00000487801 237 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 RPL38P4-201ENST00000502376 214 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC092349.1-201ENST00000504903 310 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC010587.1-201ENST00000505809 469 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 TMEM248P1-201ENST00000510579 951 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.64□□□□□ -1.35
EPHA4P54764 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC107953.1-201ENST00000522216 297 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC008429.2-201ENST00000523057 864 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHA4P54764 MIR3167-201ENST00000579623 85 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC024267.2-201ENST00000582737 417 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 MIR3171-201ENST00000584270 74 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC006116.10-201ENST00000591836 581 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC020914.7-201ENST00000594477 545 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 Z84480.1-201ENST00000605131 311 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHA4P54764 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHA4P54764 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
EPHA4P54764 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.64□□□□□ -1.35
EPHA4P54764 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
EPHA4P54764 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.64□□□□□ -1.35
EPHA4P54764 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 AC092162.3-201ENST00000624511 1624 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 AC114546.3-201ENST00000623582 1734 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 AC130304.1-201ENST00000622942 2385 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHA4P54764 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHA4P54764 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
EPHA4P54764 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHA4P54764 AC005294.1-201ENST00000355509 281 ntBASIC6.63□□□□□ -1.35
EPHA4P54764 Y_RNA.202-201ENST00000364083 110 ntBASIC6.63□□□□□ -1.35
EPHA4P54764 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHA4P54764 RNU2-9P-201ENST00000410194 145 ntBASIC6.63□□□□□ -1.35
EPHA4P54764 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHA4P54764 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHA4P54764 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHA4P54764 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHA4P54764 AC024082.2-201ENST00000434771 238 ntBASIC6.63□□□□□ -1.35
EPHA4P54764 MTND3P2-201ENST00000438452 342 ntBASIC6.63□□□□□ -1.35
EPHA4P54764 RPS18P1-201ENST00000447840 458 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms