Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AL161631.1-201ENST00000417933 486 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AL451062.2-201ENST00000427515 271 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 NANOGP10-201ENST00000453325 895 ntBASIC5.13□□□□□ -1.59
NUP98P52948 SNRPCP3-201ENST00000474888 476 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP98P52948 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.13□□□□□ -1.59
NUP98P52948 RNA5SP179-201ENST00000517284 121 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AC091516.1-201ENST00000549191 703 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP98P52948 MIR5685-201ENST00000579080 79 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AC104662.1-201ENST00000604448 511 ntBASIC5.13□□□□□ -1.59
NUP98P52948 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
NUP98P52948 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 AC090220.1-201ENST00000593078 1699 ntBASIC5.13□□□□□ -1.59
NUP98P52948 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP98P52948 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NUP98P52948 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
NUP98P52948 AC016588.2-201ENST00000632484 3021 ntBASIC5.13□□□□□ -1.59
NUP98P52948 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP98P52948 SKP1P3-201ENST00000429280 487 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP98P52948 AL031584.1-201ENST00000447169 754 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP98P52948 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP98P52948 AC008759.1-201ENST00000589783 983 ntBASIC5.13□□□□□ -1.59
NUP98P52948 AL592436.1-201ENST00000605135 558 ntBASIC5.13□□□□□ -1.59
NUP98P52948 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP98P52948 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP98P52948 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP98P52948 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.12□□□□□ -1.59
NUP98P52948 RNA5SP119-201ENST00000362715 117 ntBASIC5.12□□□□□ -1.59
NUP98P52948 AL359643.1-201ENST00000404109 423 ntBASIC5.12□□□□□ -1.59
NUP98P52948 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP98P52948 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.12□□□□□ -1.59
NUP98P52948 AL500522.2-201ENST00000448562 343 ntBASIC5.12□□□□□ -1.59
NUP98P52948 RPL7P24-201ENST00000493052 752 ntBASIC5.12□□□□□ -1.59
NUP98P52948 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.12□□□□□ -1.59
NUP98P52948 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.12□□□□□ -1.59
NUP98P52948 BNIP3P22-201ENST00000593399 556 ntBASIC5.12□□□□□ -1.59
NUP98P52948 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.12□□□□□ -1.59
NUP98P52948 FP236240.3-201ENST00000623061 327 ntBASIC5.12□□□□□ -1.59
NUP98P52948 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.12□□□□□ -1.59
NUP98P52948 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 AP000641.1-201ENST00000531988 1639 ntBASIC5.12□□□□□ -1.59
NUP98P52948 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NUP98P52948 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUP98P52948 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUP98P52948 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUP98P52948 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NUP98P52948 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 RPS23P10-201ENST00000416185 486 ntBASIC5.11□□□□□ -1.59
NUP98P52948 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP98P52948 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP98P52948 NOTCH2P1-201ENST00000443481 624 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP98P52948 AL358232.1-201ENST00000448030 501 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AC104306.1-201ENST00000449702 371 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP98P52948 RAD23BP3-201ENST00000454157 1152 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AL133372.1-201ENST00000493565 745 ntBASIC5.11□□□□□ -1.59
NUP98P52948 RPL29P14-201ENST00000495837 428 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AC026403.1-201ENST00000518938 295 ntBASIC5.11□□□□□ -1.59
NUP98P52948 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP98P52948 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP98P52948 LSM3P2-201ENST00000551246 273 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP98P52948 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP98P52948 AL356121.2-201ENST00000624715 780 ntBASIC5.11□□□□□ -1.59
NUP98P52948 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NUP98P52948 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NUP98P52948 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 MIR195-201ENST00000385194 87 ntBASIC5.11□□□□□ -1.59
NUP98P52948 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP98P52948 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP98P52948 RNA5SP103-201ENST00000459503 118 ntBASIC5.11□□□□□ -1.59
NUP98P52948 RPS20P21-201ENST00000466859 343 ntBASIC5.11□□□□□ -1.59
NUP98P52948 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.11□□□□□ -1.59
NUP98P52948 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms