Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC026403.1-201ENST00000518938 295 ntBASIC6.01□□□□□ -1.45
MSH6P52701 DUXAP2-201ENST00000519198 589 ntBASIC6.01□□□□□ -1.45
MSH6P52701 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.01□□□□□ -1.45
MSH6P52701 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH6P52701 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH6P52701 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH6P52701 AL391261.4-201ENST00000616012 481 ntBASIC6.01□□□□□ -1.45
MSH6P52701 AC009093.8-201ENST00000641769 292 ntBASIC6.01□□□□□ -1.45
MSH6P52701 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.01□□□□□ -1.45
MSH6P52701 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
MSH6P52701 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.01□□□□□ -1.45
MSH6P52701 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MSH6P52701 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6□□□□□ -1.45
MSH6P52701 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 FAM91A3P-201ENST00000456826 2544 ntBASIC6□□□□□ -1.45
MSH6P52701 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MSH6P52701 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MSH6P52701 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6□□□□□ -1.45
MSH6P52701 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6□□□□□ -1.45
MSH6P52701 CTSL3P-202ENST00000412179 788 ntBASIC6□□□□□ -1.45
MSH6P52701 GTF3AP5-201ENST00000442645 697 ntBASIC6□□□□□ -1.45
MSH6P52701 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6□□□□□ -1.45
MSH6P52701 AL583832.1-201ENST00000603227 784 ntBASIC6□□□□□ -1.45
MSH6P52701 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6□□□□□ -1.45
MSH6P52701 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6□□□□□ -1.45
MSH6P52701 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6□□□□□ -1.45
MSH6P52701 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6□□□□□ -1.45
MSH6P52701 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH6P52701 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH6P52701 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
MSH6P52701 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH6P52701 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
MSH6P52701 RPL21P43-201ENST00000425440 472 ntBASIC5.99□□□□□ -1.45
MSH6P52701 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH6P52701 ATP1B1P1-201ENST00000509767 915 ntBASIC5.99□□□□□ -1.45
MSH6P52701 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH6P52701 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH6P52701 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.99□□□□□ -1.45
MSH6P52701 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH6P52701 AC007342.8-201ENST00000623278 678 ntBASIC5.99□□□□□ -1.45
MSH6P52701 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH6P52701 CASC19-261ENST00000641853 1638 ntBASIC5.99□□□□□ -1.45
MSH6P52701 AC016588.2-201ENST00000632484 3021 ntBASIC5.99□□□□□ -1.45
MSH6P52701 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH6P52701 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH6P52701 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH6P52701 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
MSH6P52701 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH6P52701 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
MSH6P52701 CASC19-206ENST00000641028 1430 ntBASIC5.98□□□□□ -1.45
MSH6P52701 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
MSH6P52701 RNU6-316P-201ENST00000391027 107 ntBASIC5.98□□□□□ -1.45
MSH6P52701 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH6P52701 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH6P52701 UBE2V1P3-201ENST00000439651 417 ntBASIC5.98□□□□□ -1.45
MSH6P52701 MRPL48P1-201ENST00000445390 636 ntBASIC5.98□□□□□ -1.45
MSH6P52701 AK4P6-201ENST00000505168 528 ntBASIC5.98□□□□□ -1.45
MSH6P52701 HMGB3P16-201ENST00000508037 287 ntBASIC5.98□□□□□ -1.45
MSH6P52701 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH6P52701 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH6P52701 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
MSH6P52701 ZNF415P1-201ENST00000582279 1166 ntBASIC5.98□□□□□ -1.45
MSH6P52701 AL159169.3-201ENST00000608871 561 ntBASIC5.98□□□□□ -1.45
MSH6P52701 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH6P52701 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MSH6P52701 AC125336.1-201ENST00000508893 2827 ntBASIC5.98□□□□□ -1.45
MSH6P52701 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH6P52701 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MSH6P52701 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH6P52701 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
MSH6P52701 AL603750.1-201ENST00000624216 1717 ntBASIC5.98□□□□□ -1.45
MSH6P52701 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH6P52701 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 OR11H4-201ENST00000315409 1082 ntBASIC5.97□□□□□ -1.45
MSH6P52701 RNA5SP175-201ENST00000364275 119 ntBASIC5.97□□□□□ -1.45
MSH6P52701 MIR634-201ENST00000385208 97 ntBASIC5.97□□□□□ -1.45
MSH6P52701 FCF1P5-201ENST00000406490 482 ntBASIC5.97□□□□□ -1.45
MSH6P52701 AC068533.1-201ENST00000418542 415 ntBASIC5.97□□□□□ -1.45
MSH6P52701 OR2AH1P-201ENST00000425717 928 ntBASIC5.97□□□□□ -1.45
MSH6P52701 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.97□□□□□ -1.45
MSH6P52701 HSPE1P27-201ENST00000430808 296 ntBASIC5.97□□□□□ -1.45
MSH6P52701 AC091286.1-201ENST00000431233 461 ntBASIC5.97□□□□□ -1.45
MSH6P52701 KATNBL1P2-201ENST00000433311 835 ntBASIC5.97□□□□□ -1.45
MSH6P52701 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.97□□□□□ -1.45
MSH6P52701 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.97□□□□□ -1.45
MSH6P52701 RNA5SP246-201ENST00000458909 119 ntBASIC5.97□□□□□ -1.45
MSH6P52701 AC022336.1-201ENST00000475510 337 ntBASIC5.97□□□□□ -1.45
MSH6P52701 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.97□□□□□ -1.45
MSH6P52701 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.97□□□□□ -1.45
MSH6P52701 RNA5SP73-201ENST00000516744 108 ntBASIC5.97□□□□□ -1.45
MSH6P52701 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.97□□□□□ -1.45
MSH6P52701 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms