Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 RNU1-32P-201ENST00000363937 159 ntBASIC4.74□□□□□ -1.65
CASP4P49662 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CASP4P49662 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CASP4P49662 NRBF2P2-201ENST00000413087 861 ntBASIC4.74□□□□□ -1.65
CASP4P49662 RPL21P108-201ENST00000413857 481 ntBASIC4.74□□□□□ -1.65
CASP4P49662 MTND4LP13-201ENST00000425022 298 ntBASIC4.74□□□□□ -1.65
CASP4P49662 RPL23AP52-201ENST00000439311 478 ntBASIC4.74□□□□□ -1.65
CASP4P49662 FHP1-201ENST00000442741 703 ntBASIC4.74□□□□□ -1.65
CASP4P49662 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.74□□□□□ -1.65
CASP4P49662 CYCSP42-201ENST00000450823 238 ntBASIC4.74□□□□□ -1.65
CASP4P49662 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.74□□□□□ -1.65
CASP4P49662 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.74□□□□□ -1.65
CASP4P49662 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.74□□□□□ -1.65
CASP4P49662 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.74□□□□□ -1.65
CASP4P49662 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.74□□□□□ -1.65
CASP4P49662 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.74□□□□□ -1.65
CASP4P49662 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.74□□□□□ -1.65
CASP4P49662 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.74□□□□□ -1.65
CASP4P49662 AC008694.2-201ENST00000517591 306 ntBASIC4.74□□□□□ -1.65
CASP4P49662 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.74□□□□□ -1.65
CASP4P49662 AC107918.3-201ENST00000533272 382 ntBASIC4.74□□□□□ -1.65
CASP4P49662 TRAV8-5-201ENST00000537369 341 ntBASIC4.74□□□□□ -1.65
CASP4P49662 AL352979.3-201ENST00000553515 247 ntBASIC4.74□□□□□ -1.65
CASP4P49662 FAM106CP-201ENST00000582212 507 ntBASIC4.74□□□□□ -1.65
CASP4P49662 FAM60CP-201ENST00000591086 664 ntBASIC4.74□□□□□ -1.65
CASP4P49662 AC133552.5-201ENST00000604266 540 ntBASIC4.74□□□□□ -1.65
CASP4P49662 AL008729.2-201ENST00000606393 473 ntBASIC4.74□□□□□ -1.65
CASP4P49662 AC004241.3-201ENST00000611728 517 ntBASIC4.74□□□□□ -1.65
CASP4P49662 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.74□□□□□ -1.65
CASP4P49662 AC131238.1-201ENST00000617135 328 ntBASIC4.74□□□□□ -1.65
CASP4P49662 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.74□□□□□ -1.65
CASP4P49662 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.74□□□□□ -1.65
CASP4P49662 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.74□□□□□ -1.65
CASP4P49662 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CASP4P49662 MAPK10-320ENST00000641462 6696 ntBASIC4.74□□□□□ -1.65
CASP4P49662 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CASP4P49662 AL450326.2-201ENST00000421913 1962 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.73□□□□□ -1.65
CASP4P49662 UBTFL3-201ENST00000418934 1024 ntBASIC4.73□□□□□ -1.65
CASP4P49662 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.73□□□□□ -1.65
CASP4P49662 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.73□□□□□ -1.65
CASP4P49662 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.73□□□□□ -1.65
CASP4P49662 MTND6P18-201ENST00000439477 513 ntBASIC4.73□□□□□ -1.65
CASP4P49662 CBX1P1-201ENST00000440184 427 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.73□□□□□ -1.65
CASP4P49662 ABCF2P2-201ENST00000450549 296 ntBASIC4.73□□□□□ -1.65
CASP4P49662 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.73□□□□□ -1.65
CASP4P49662 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.73□□□□□ -1.65
CASP4P49662 UBTFL6-201ENST00000477929 1024 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC147055.1-201ENST00000509261 750 ntBASIC4.73□□□□□ -1.65
CASP4P49662 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.73□□□□□ -1.65
CASP4P49662 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.73□□□□□ -1.65
CASP4P49662 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CASP4P49662 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.73□□□□□ -1.65
CASP4P49662 CD24P2-201ENST00000565486 219 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.73□□□□□ -1.65
CASP4P49662 MIR5096-201ENST00000583713 70 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC019193.2-201ENST00000610012 634 ntBASIC4.73□□□□□ -1.65
CASP4P49662 MIR6748-201ENST00000610433 71 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AL021997.2-201ENST00000615674 271 ntBASIC4.73□□□□□ -1.65
CASP4P49662 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.73□□□□□ -1.65
CASP4P49662 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.73□□□□□ -1.65
CASP4P49662 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CASP4P49662 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.72□□□□□ -1.65
CASP4P49662 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CASP4P49662 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CASP4P49662 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CASP4P49662 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 RNU1-15P-201ENST00000353977 144 ntBASIC4.72□□□□□ -1.65
CASP4P49662 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.72□□□□□ -1.65
CASP4P49662 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASP4P49662 SNORA11F-201ENST00000408237 128 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 TRIM60P17-201ENST00000415181 719 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.72□□□□□ -1.65
CASP4P49662 PDSS1P1-201ENST00000422953 1114 ntBASIC4.72□□□□□ -1.65
CASP4P49662 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.72□□□□□ -1.65
CASP4P49662 AC073335.1-201ENST00000427776 363 ntBASIC4.72□□□□□ -1.65
CASP4P49662 DNAJC19P7-201ENST00000428811 344 ntBASIC4.72□□□□□ -1.65
CASP4P49662 HMGB3P9-201ENST00000441799 583 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms