Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC012497.1-201ENST00000429392 575 ntBASIC4.88□□□□□ -1.63
LHX1P48742 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX1P48742 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.88□□□□□ -1.63
LHX1P48742 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.88□□□□□ -1.63
LHX1P48742 AL935212.3-201ENST00000450729 284 ntBASIC4.88□□□□□ -1.63
LHX1P48742 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX1P48742 MTND2P28-201ENST00000457540 1044 ntBASIC4.88□□□□□ -1.63
LHX1P48742 RN7SL481P-201ENST00000477764 299 ntBASIC4.88□□□□□ -1.63
LHX1P48742 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.88□□□□□ -1.63
LHX1P48742 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
LHX1P48742 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.88□□□□□ -1.63
LHX1P48742 RAB9BP1-201ENST00000519581 626 ntBASIC4.88□□□□□ -1.63
LHX1P48742 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX1P48742 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.88□□□□□ -1.63
LHX1P48742 OSBPL9P3-201ENST00000534523 595 ntBASIC4.88□□□□□ -1.63
LHX1P48742 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX1P48742 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.88□□□□□ -1.63
LHX1P48742 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.88□□□□□ -1.63
LHX1P48742 RPL12P25-202ENST00000598100 674 ntBASIC4.88□□□□□ -1.63
LHX1P48742 AC008782.1-201ENST00000603386 430 ntBASIC4.88□□□□□ -1.63
LHX1P48742 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.88□□□□□ -1.63
LHX1P48742 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LHX1P48742 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX1P48742 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX1P48742 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX1P48742 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LHX1P48742 SAMMSON-213ENST00000641336 1521 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AL731532.2-201ENST00000623542 1953 ntBASIC4.87□□□□□ -1.63
LHX1P48742 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.87□□□□□ -1.63
LHX1P48742 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 AL355852.1-201ENST00000454081 1771 ntBASIC4.87□□□□□ -1.63
LHX1P48742 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LHX1P48742 PTGES3P2-201ENST00000407942 482 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.87□□□□□ -1.63
LHX1P48742 RPEP3-201ENST00000425462 676 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.87□□□□□ -1.63
LHX1P48742 CYCSP42-201ENST00000450823 238 ntBASIC4.87□□□□□ -1.63
LHX1P48742 RPL23AP23-201ENST00000452590 471 ntBASIC4.87□□□□□ -1.63
LHX1P48742 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 SYT14P1-201ENST00000481459 721 ntBASIC4.87□□□□□ -1.63
LHX1P48742 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
LHX1P48742 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.87□□□□□ -1.63
LHX1P48742 AC069304.1-201ENST00000491593 704 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.87□□□□□ -1.63
LHX1P48742 VTA1P2-201ENST00000520205 911 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.87□□□□□ -1.63
LHX1P48742 HIGD1AP5-201ENST00000529959 259 ntBASIC4.87□□□□□ -1.63
LHX1P48742 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.87□□□□□ -1.63
LHX1P48742 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.87□□□□□ -1.63
LHX1P48742 AC098483.2-201ENST00000603158 454 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC012557.1-201ENST00000607115 611 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC084824.5-201ENST00000612009 413 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC245389.2-201ENST00000616023 576 ntBASIC4.87□□□□□ -1.63
LHX1P48742 MIR8069-1-201ENST00000616627 86 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC242843.1-201ENST00000618702 573 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AL109620.1-201ENST00000618738 1197 ntBASIC4.87□□□□□ -1.63
LHX1P48742 MIR8069-2-201ENST00000621412 86 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC145207.9-201ENST00000623802 325 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AC119674.1-212ENST00000641155 993 ntBASIC4.87□□□□□ -1.63
LHX1P48742 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.87□□□□□ -1.63
LHX1P48742 ZNF90P1-201ENST00000480493 1951 ntBASIC4.87□□□□□ -1.63
LHX1P48742 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX1P48742 MAPK10-320ENST00000641462 6696 ntBASIC4.87□□□□□ -1.63
LHX1P48742 AL137100.1-201ENST00000556703 1620 ntBASIC4.86□□□□□ -1.63
LHX1P48742 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
LHX1P48742 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LHX1P48742 AL022393.1-201ENST00000625142 1677 ntBASIC4.86□□□□□ -1.63
LHX1P48742 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 AC000374.1-201ENST00000434698 1745 ntBASIC4.86□□□□□ -1.63
LHX1P48742 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
LHX1P48742 AC133552.1-201ENST00000569988 4007 ntBASIC4.86□□□□□ -1.63
LHX1P48742 RAD17P1-201ENST00000418130 2042 ntBASIC4.86□□□□□ -1.63
LHX1P48742 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 RNU1-83P-201ENST00000363426 164 ntBASIC4.86□□□□□ -1.63
LHX1P48742 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
LHX1P48742 OR51A6P-201ENST00000418680 1004 ntBASIC4.86□□□□□ -1.63
LHX1P48742 RPL23AP93-201ENST00000440847 484 ntBASIC4.86□□□□□ -1.63
LHX1P48742 NPM1P17-201ENST00000479221 602 ntBASIC4.86□□□□□ -1.63
LHX1P48742 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.86□□□□□ -1.63
LHX1P48742 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 CEACAMP10-202ENST00000495431 496 ntBASIC4.86□□□□□ -1.63
LHX1P48742 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.86□□□□□ -1.63
LHX1P48742 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 HAUS1P3-201ENST00000523909 662 ntBASIC4.86□□□□□ -1.63
LHX1P48742 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.86□□□□□ -1.63
LHX1P48742 CR383656.14-201ENST00000551951 406 ntBASIC4.86□□□□□ -1.63
LHX1P48742 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.86□□□□□ -1.63
LHX1P48742 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.86□□□□□ -1.63
LHX1P48742 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms