Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 SNORA70.17-201ENST00000516449 133 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCC3P46736 NPM1P6-201ENST00000521088 871 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCC3P46736 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCC3P46736 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCC3P46736 AL358913.1-201ENST00000554342 121 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC245128.3-201ENST00000594721 748 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC124856.1-201ENST00000600819 896 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC103792.1-201ENST00000603591 919 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 AC100814.1-201ENST00000606963 623 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCC3P46736 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 AC068724.3-201ENST00000625906 87 ntBASIC4.74□□□□□ -1.65
BRCC3P46736 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCC3P46736 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCC3P46736 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCC3P46736 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 NXPH1-205ENST00000602349 1953 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCC3P46736 RNU1-132P-201ENST00000364300 164 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 FCF1P5-201ENST00000406490 482 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 RPL23AP26-201ENST00000412728 464 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 NRBF2P2-201ENST00000413087 861 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.73□□□□□ -1.65
BRCC3P46736 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 RPL23AP52-201ENST00000439311 478 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 ACTR3P2-201ENST00000439585 1257 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 C1DP3-201ENST00000455013 423 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 AC105137.1-201ENST00000484355 562 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 ATG10-AS1-201ENST00000504846 648 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 BTG4P1-201ENST00000510421 183 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 MTND2P31-201ENST00000512602 616 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 RNA5SP497-201ENST00000516081 97 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 SNORA31.9-201ENST00000516429 84 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.73□□□□□ -1.65
BRCC3P46736 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 AC067805.1-201ENST00000559344 470 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCC3P46736 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 AC091178.1-203ENST00000584586 279 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 IPO5P1-202ENST00000600039 287 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 uc_338.13-201ENST00000618243 179 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCC3P46736 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCC3P46736 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 EIF2AP4-201ENST00000424793 1781 ntBASIC4.73□□□□□ -1.65
BRCC3P46736 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCC3P46736 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCC3P46736 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRCC3P46736 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRCC3P46736 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRCC3P46736 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.72□□□□□ -1.65
BRCC3P46736 RNA5SP151-201ENST00000365632 117 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 BMS1P3-201ENST00000372011 932 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 AL583835.1-201ENST00000399570 407 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 RPS20P14-201ENST00000412545 360 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.72□□□□□ -1.65
BRCC3P46736 RPL21P91-201ENST00000429231 479 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 RSL24D1P8-201ENST00000434442 492 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 UBE2V1P3-201ENST00000439651 417 ntBASIC4.72□□□□□ -1.65
BRCC3P46736 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.72□□□□□ -1.65
BRCC3P46736 MTND2P3-201ENST00000452458 470 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms