Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 RPL21P7-201ENST00000557463 483 ntBASIC4.9□□□□□ -1.63
SSR1P43307 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.9□□□□□ -1.63
SSR1P43307 AGGF1P8-201ENST00000562979 1000 ntBASIC4.9□□□□□ -1.63
SSR1P43307 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 RN7SL652P-201ENST00000577769 300 ntBASIC4.9□□□□□ -1.63
SSR1P43307 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
SSR1P43307 AL031320.1-201ENST00000604177 357 ntBASIC4.9□□□□□ -1.63
SSR1P43307 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSR1P43307 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSR1P43307 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.9□□□□□ -1.63
SSR1P43307 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSR1P43307 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.9□□□□□ -1.63
SSR1P43307 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SSR1P43307 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SSR1P43307 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.89□□□□□ -1.63
SSR1P43307 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SSR1P43307 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSR1P43307 MIR93-201ENST00000385024 80 ntBASIC4.89□□□□□ -1.63
SSR1P43307 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.89□□□□□ -1.63
SSR1P43307 AC073464.3-201ENST00000422564 712 ntBASIC4.89□□□□□ -1.63
SSR1P43307 AL121578.1-201ENST00000428051 892 ntBASIC4.89□□□□□ -1.63
SSR1P43307 BX119904.1-201ENST00000432026 348 ntBASIC4.89□□□□□ -1.63
SSR1P43307 AL627308.1-201ENST00000435693 821 ntBASIC4.89□□□□□ -1.63
SSR1P43307 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SSR1P43307 AC004453.1-201ENST00000487895 408 ntBASIC4.89□□□□□ -1.63
SSR1P43307 AC025164.1-201ENST00000496249 478 ntBASIC4.89□□□□□ -1.63
SSR1P43307 CCNHP1-201ENST00000513311 678 ntBASIC4.89□□□□□ -1.63
SSR1P43307 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.89□□□□□ -1.63
SSR1P43307 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.89□□□□□ -1.63
SSR1P43307 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.89□□□□□ -1.63
SSR1P43307 AC044860.2-201ENST00000561005 179 ntBASIC4.89□□□□□ -1.63
SSR1P43307 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.89□□□□□ -1.63
SSR1P43307 MIR4458-201ENST00000578872 75 ntBASIC4.89□□□□□ -1.63
SSR1P43307 AL049844.2-201ENST00000604280 628 ntBASIC4.89□□□□□ -1.63
SSR1P43307 C2orf27A-204ENST00000623058 969 ntBASIC4.89□□□□□ -1.63
SSR1P43307 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.89□□□□□ -1.63
SSR1P43307 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSR1P43307 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSR1P43307 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSR1P43307 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SSR1P43307 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SSR1P43307 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSR1P43307 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.89□□□□□ -1.63
SSR1P43307 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
SSR1P43307 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 OR56B2P-201ENST00000317102 954 ntBASIC4.88□□□□□ -1.63
SSR1P43307 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.88□□□□□ -1.63
SSR1P43307 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSR1P43307 CEACAMP8-201ENST00000413902 580 ntBASIC4.88□□□□□ -1.63
SSR1P43307 GLUD1P9-201ENST00000420997 1173 ntBASIC4.88□□□□□ -1.63
SSR1P43307 NANOGP6-201ENST00000429190 847 ntBASIC4.88□□□□□ -1.63
SSR1P43307 NRBF2P3-201ENST00000432731 865 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.88□□□□□ -1.63
SSR1P43307 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.88□□□□□ -1.63
SSR1P43307 AL133477.1-201ENST00000457472 514 ntBASIC4.88□□□□□ -1.63
SSR1P43307 RPL7P16-201ENST00000479738 738 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 RN7SKP276-201ENST00000516242 268 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.88□□□□□ -1.63
SSR1P43307 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.88□□□□□ -1.63
SSR1P43307 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.88□□□□□ -1.63
SSR1P43307 AC009117.1-201ENST00000563948 554 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AC015912.2-201ENST00000571053 181 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AP005901.4-201ENST00000577336 569 ntBASIC4.88□□□□□ -1.63
SSR1P43307 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.88□□□□□ -1.63
SSR1P43307 AC244505.7-201ENST00000599675 272 ntBASIC4.88□□□□□ -1.63
SSR1P43307 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSR1P43307 AC008966.2-201ENST00000606157 453 ntBASIC4.88□□□□□ -1.63
SSR1P43307 MIR4727-201ENST00000622232 55 ntBASIC4.88□□□□□ -1.63
SSR1P43307 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSR1P43307 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.88□□□□□ -1.63
SSR1P43307 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.88□□□□□ -1.63
SSR1P43307 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSR1P43307 MFSD8-220ENST00000641243 1422 ntBASIC4.88□□□□□ -1.63
SSR1P43307 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms