Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNU6-481P-201ENST00000384194 107 ntBASIC5.05□□□□□ -1.6
HADHAP40939 RNU6-610P-201ENST00000384264 107 ntBASIC5.05□□□□□ -1.6
HADHAP40939 SNORA66-201ENST00000384792 133 ntBASIC5.05□□□□□ -1.6
HADHAP40939 Z97832.1-201ENST00000402490 328 ntBASIC5.05□□□□□ -1.6
HADHAP40939 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.05□□□□□ -1.6
HADHAP40939 MTND4P11-201ENST00000417020 1058 ntBASIC5.05□□□□□ -1.6
HADHAP40939 TMBIM7P-201ENST00000418074 855 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AL358176.3-201ENST00000420757 454 ntBASIC5.05□□□□□ -1.6
HADHAP40939 VN1R54P-201ENST00000435210 1049 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 AC006994.1-201ENST00000438212 839 ntBASIC5.05□□□□□ -1.6
HADHAP40939 HMGB3P9-201ENST00000441799 583 ntBASIC5.05□□□□□ -1.6
HADHAP40939 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 ARL5AP2-201ENST00000444698 533 ntBASIC5.05□□□□□ -1.6
HADHAP40939 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.05□□□□□ -1.6
HADHAP40939 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 RN7SL346P-201ENST00000491561 294 ntBASIC5.05□□□□□ -1.6
HADHAP40939 RPS23P1-201ENST00000491662 432 ntBASIC5.05□□□□□ -1.6
HADHAP40939 RN7SL244P-201ENST00000493405 297 ntBASIC5.05□□□□□ -1.6
HADHAP40939 NDUFA5P12-201ENST00000503796 343 ntBASIC5.05□□□□□ -1.6
HADHAP40939 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HADHAP40939 AF186190.1-201ENST00000517470 480 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AP003355.1-201ENST00000518956 587 ntBASIC5.05□□□□□ -1.6
HADHAP40939 SMARCE1P4-201ENST00000523647 241 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.05□□□□□ -1.6
HADHAP40939 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 AL121594.4-201ENST00000556211 1196 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.05□□□□□ -1.6
HADHAP40939 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.05□□□□□ -1.6
HADHAP40939 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.05□□□□□ -1.6
HADHAP40939 AC133552.5-201ENST00000604266 540 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AC073569.3-201ENST00000619055 682 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.05□□□□□ -1.6
HADHAP40939 AP002799.1-201ENST00000623552 423 ntBASIC5.05□□□□□ -1.6
HADHAP40939 AC010872.1-201ENST00000624225 675 ntBASIC5.05□□□□□ -1.6
HADHAP40939 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.05□□□□□ -1.6
HADHAP40939 HSPA8P19-201ENST00000505359 1517 ntBASIC5.05□□□□□ -1.6
HADHAP40939 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.05□□□□□ -1.6
HADHAP40939 AC022893.2-201ENST00000564832 3296 ntBASIC5.05□□□□□ -1.6
HADHAP40939 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.05□□□□□ -1.6
HADHAP40939 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HADHAP40939 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HADHAP40939 SNURFL-201ENST00000309296 343 ntBASIC5.04□□□□□ -1.6
HADHAP40939 OR4K17-201ENST00000315543 1032 ntBASIC5.04□□□□□ -1.6
HADHAP40939 RNU6-468P-201ENST00000384003 109 ntBASIC5.04□□□□□ -1.6
HADHAP40939 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 AL078599.1-201ENST00000402075 293 ntBASIC5.04□□□□□ -1.6
HADHAP40939 SNORA77-201ENST00000408716 125 ntBASIC5.04□□□□□ -1.6
HADHAP40939 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 RN7SKP125-201ENST00000410481 302 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC009965.2-201ENST00000425328 970 ntBASIC5.04□□□□□ -1.6
HADHAP40939 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 NPM1P24-201ENST00000428039 894 ntBASIC5.04□□□□□ -1.6
HADHAP40939 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 PPIAP13-201ENST00000434706 478 ntBASIC5.04□□□□□ -1.6
HADHAP40939 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 RPS29P9-201ENST00000440360 171 ntBASIC5.04□□□□□ -1.6
HADHAP40939 TXNP5-201ENST00000441043 315 ntBASIC5.04□□□□□ -1.6
HADHAP40939 OR7E125P-201ENST00000443450 846 ntBASIC5.04□□□□□ -1.6
HADHAP40939 MRPL48P1-201ENST00000445390 636 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AL591473.1-201ENST00000464297 313 ntBASIC5.04□□□□□ -1.6
HADHAP40939 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.04□□□□□ -1.6
HADHAP40939 AC093270.2-201ENST00000486157 792 ntBASIC5.04□□□□□ -1.6
HADHAP40939 HMGN2P25-201ENST00000486956 268 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC010350.1-201ENST00000504908 231 ntBASIC5.04□□□□□ -1.6
HADHAP40939 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 COX6B1P5-201ENST00000509843 249 ntBASIC5.04□□□□□ -1.6
HADHAP40939 MTCO3P27-201ENST00000514397 196 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.04□□□□□ -1.6
HADHAP40939 RN7SKP46-201ENST00000515942 234 ntBASIC5.04□□□□□ -1.6
HADHAP40939 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 OR7E128P-201ENST00000532736 1024 ntBASIC5.04□□□□□ -1.6
HADHAP40939 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
HADHAP40939 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.04□□□□□ -1.6
HADHAP40939 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HADHAP40939 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms