Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGCLP35914 NXPH1-205ENST00000602349 1953 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCLP35914 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 AC139713.2-215ENST00000641428 5037 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HMGCLP35914 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMGCLP35914 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
HMGCLP35914 RNU6-386P-201ENST00000362650 107 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 RNU6-618P-201ENST00000363518 112 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 RNA5SP28-201ENST00000363841 119 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 AC019070.1-201ENST00000415008 1024 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC069213.2-201ENST00000420238 366 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCLP35914 RPS12P10-201ENST00000427031 377 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCLP35914 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCLP35914 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGCLP35914 MRPS33P4-201ENST00000434892 317 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCLP35914 AL138787.1-202ENST00000437804 898 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 RPS15AP29-201ENST00000445539 400 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGCLP35914 AL133244.1-201ENST00000456007 258 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 ATP5G1P3-201ENST00000463301 410 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC021146.3-201ENST00000511911 260 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 snoU109.6-201ENST00000516831 118 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC012414.2-201ENST00000559474 187 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 ATP5J2P6-201ENST00000565203 266 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCLP35914 AC027455.1-201ENST00000574104 594 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGCLP35914 AC104785.1-201ENST00000603220 588 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AP002360.3-201ENST00000607673 710 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 uc_338.18-201ENST00000615451 175 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC020763.5-201ENST00000623298 430 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 AC006065.6-201ENST00000625201 545 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGCLP35914 RAD17P1-201ENST00000418130 2042 ntBASIC4.49□□□□□ -1.69
HMGCLP35914 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGCLP35914 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGCLP35914 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 MAPK10-304ENST00000641341 3984 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 VPS35P1-201ENST00000563400 1518 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 OR10J6P-201ENST00000289731 930 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 RNU1-63P-201ENST00000383902 164 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 SNORD96B-201ENST00000386148 79 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMGCLP35914 AC104297.1-201ENST00000393779 870 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.48□□□□□ -1.69
HMGCLP35914 CEACAMP8-201ENST00000413902 580 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC245028.1-201ENST00000423259 256 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 GTF2IP2-201ENST00000424290 697 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 RPEP3-201ENST00000425462 676 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 NPM1P26-201ENST00000426339 738 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCLP35914 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCLP35914 AL606490.8-201ENST00000441624 319 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 GEMIN8P3-201ENST00000445417 720 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC099063.2-201ENST00000446360 662 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCLP35914 AC089999.1-201ENST00000460336 374 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AK3P4-201ENST00000504283 583 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC111000.3-201ENST00000508057 576 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 MTCYBP19-201ENST00000517463 1124 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 OR7E10P-201ENST00000526420 991 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 HMGB3P26-201ENST00000560051 582 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 SNORD39.2-201ENST00000579995 76 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC093765.1-201ENST00000603758 881 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 AC119674.1-220ENST00000641502 1048 ntBASIC4.48□□□□□ -1.69
HMGCLP35914 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HMGCLP35914 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCLP35914 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCLP35914 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms