Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A5P29400 CCAT2-201ENST00000630920 1752 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A5P29400 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.95□□□□□ -1.62
COL4A5P29400 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.95□□□□□ -1.62
COL4A5P29400 PDSS1P1-201ENST00000422953 1114 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A5P29400 ABCF2P2-201ENST00000450549 296 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 AC090013.1-201ENST00000485147 480 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A5P29400 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.95□□□□□ -1.62
COL4A5P29400 AC005255.1-201ENST00000593748 216 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 AL353726.1-201ENST00000614041 1000 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 AL391261.4-201ENST00000616012 481 ntBASIC4.95□□□□□ -1.62
COL4A5P29400 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A5P29400 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.95□□□□□ -1.62
COL4A5P29400 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL4A5P29400 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL4A5P29400 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.95□□□□□ -1.62
COL4A5P29400 AC032011.1-201ENST00000611703 1549 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL4A5P29400 AL022393.1-201ENST00000625142 1677 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A5P29400 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 AC007068.1-201ENST00000396690 844 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 AC233289.1-201ENST00000403700 508 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 RPL7P15-201ENST00000461190 712 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 RN7SL323P-201ENST00000494712 295 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A5P29400 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.94□□□□□ -1.62
COL4A5P29400 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.94□□□□□ -1.62
COL4A5P29400 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.94□□□□□ -1.62
COL4A5P29400 MIR3922-201ENST00000585192 84 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 AL160281.1-201ENST00000605307 311 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 OR2BH1P-201ENST00000608850 864 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.94□□□□□ -1.62
COL4A5P29400 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A5P29400 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A5P29400 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.94□□□□□ -1.62
COL4A5P29400 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A5P29400 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A5P29400 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL4A5P29400 Z95114.1-201ENST00000624264 14574 ntBASIC4.94□□□□□ -1.62
COL4A5P29400 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL4A5P29400 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 RNU1-44P-201ENST00000384453 163 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 RPL21P17-201ENST00000397467 475 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 SNORA57.3-201ENST00000411095 141 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A5P29400 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.93□□□□□ -1.62
COL4A5P29400 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A5P29400 AC009963.4-201ENST00000448535 339 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 BNIP3P41-201ENST00000503774 571 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 HMGB3P16-201ENST00000508037 287 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 DUXAP2-201ENST00000519198 589 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.93□□□□□ -1.62
COL4A5P29400 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.93□□□□□ -1.62
COL4A5P29400 AC027176.2-201ENST00000559166 746 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A5P29400 AC011471.1-201ENST00000585766 187 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A5P29400 AC015726.1-201ENST00000602353 681 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 AC008966.2-201ENST00000606157 453 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.93□□□□□ -1.62
COL4A5P29400 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.93□□□□□ -1.62
COL4A5P29400 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.93□□□□□ -1.62
COL4A5P29400 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL4A5P29400 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL4A5P29400 AC105074.1-201ENST00000623380 3095 ntBASIC4.93□□□□□ -1.62
COL4A5P29400 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A5P29400 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.93□□□□□ -1.62
COL4A5P29400 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A5P29400 MIR218-2-201ENST00000385006 110 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 MIR1179-201ENST00000408703 91 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 RPL7P4-203ENST00000430239 730 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A5P29400 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A5P29400 RPL7P1-201ENST00000468161 747 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 RPL7P9-201ENST00000468715 747 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A5P29400 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 MIR3124-201ENST00000582636 67 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 AL442067.2-201ENST00000614033 363 ntBASIC4.92□□□□□ -1.62
COL4A5P29400 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL4A5P29400 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A5P29400 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
COL4A5P29400 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms