Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RPL23AP59-201ENST00000399415 461 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.65□□□□□ -1.51
POLR2AP24928 NANOGP2-201ENST00000435391 727 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 RPL23AP93-201ENST00000440847 484 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 EXTL2P1-201ENST00000446218 416 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 MTND1P27-201ENST00000451117 902 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.65□□□□□ -1.51
POLR2AP24928 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.65□□□□□ -1.51
POLR2AP24928 AC090948.1-201ENST00000607464 549 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.65□□□□□ -1.51
POLR2AP24928 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
POLR2AP24928 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.65□□□□□ -1.51
POLR2AP24928 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 CASC19-243ENST00000641588 1546 ntBASIC5.65□□□□□ -1.51
POLR2AP24928 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
POLR2AP24928 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 Y_RNA.194-201ENST00000363985 102 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 BMS1P3-201ENST00000372011 932 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
POLR2AP24928 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 MFSD13B-201ENST00000420133 1290 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AL356387.2-201ENST00000422272 243 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 PRELID3BP10-201ENST00000431957 584 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 UBE2D3P4-201ENST00000441973 436 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 CYCSP20-201ENST00000473154 315 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 ENPP7P11-201ENST00000505915 627 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 IGLVIV-65-201ENST00000517313 360 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AC090819.1-201ENST00000523800 1111 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC093249.4-201ENST00000564755 259 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AC090666.1-201ENST00000578241 445 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 MIMT1-201ENST00000597105 1050 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AL355802.4-201ENST00000607635 548 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AC104073.3-201ENST00000610942 955 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 U3.53-201ENST00000628922 216 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC132825.8-201ENST00000640783 297 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AP001153.1-201ENST00000641024 338 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 SALL4P2-201ENST00000423288 2910 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
POLR2AP24928 AL731566.1-201ENST00000620490 1937 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
POLR2AP24928 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
POLR2AP24928 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AL121657.1-201ENST00000327215 531 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AL359837.1-201ENST00000381357 287 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 MIR1302-8-201ENST00000408342 128 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 RPL36AP36-201ENST00000418616 301 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.64□□□□□ -1.51
POLR2AP24928 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 snoU13.29-201ENST00000459370 104 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AC090543.1-201ENST00000492168 485 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.64□□□□□ -1.51
POLR2AP24928 AC011352.1-201ENST00000512300 793 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 BUD31P1-201ENST00000521828 359 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 OR8Q1P-201ENST00000526467 655 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
POLR2AP24928 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC012213.3-201ENST00000577199 777 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.64□□□□□ -1.51
POLR2AP24928 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.64□□□□□ -1.51
POLR2AP24928 AL133243.1-201ENST00000614487 366 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC006133.1-201ENST00000617106 264 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 FRG1DP-201ENST00000635586 771 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.64□□□□□ -1.51
POLR2AP24928 OR8B1P-202ENST00000641132 1178 ntBASIC5.64□□□□□ -1.51
POLR2AP24928 AC108751.5-201ENST00000492880 1336 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
POLR2AP24928 CASC19-255ENST00000641733 1385 ntBASIC5.63□□□□□ -1.51
POLR2AP24928 AC063976.2-201ENST00000425667 3556 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms