Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC104260.2-201ENST00000623551 3497 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AL592291.1-201ENST00000403830 352 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 RNA5SP113-201ENST00000410486 84 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 MTCO3P4-201ENST00000419236 787 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 MTND4P24-201ENST00000424002 397 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 YY1P1-201ENST00000427625 668 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC006466.1-201ENST00000438721 289 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 YWHAZP2-201ENST00000440317 728 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 RPL7P31-201ENST00000450192 724 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC025164.1-201ENST00000496249 478 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC111193.1-201ENST00000504097 155 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC091868.1-201ENST00000508746 304 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC026616.1-201ENST00000523157 525 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 OR5AN2P-201ENST00000534535 896 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC106785.3-201ENST00000564064 847 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AL031320.1-201ENST00000604177 357 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC116651.1-201ENST00000609724 556 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC100827.5-201ENST00000615883 426 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC015804.1-201ENST00000622935 435 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC010435.1-201ENST00000623353 1177 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC024023.1-201ENST00000624530 922 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 TCP1P3-201ENST00000414406 1498 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AL442639.1-201ENST00000625030 1899 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AL133268.1-201ENST00000405676 1401 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AL136164.3-201ENST00000624429 3978 ntBASIC4.79□□□□□ -1.64
HLA-DPA1P20036 AC000123.3-201ENST00000624029 4975 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 SDAD1P1-202ENST00000524156 2051 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 RAD1P1-201ENST00000231383 813 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 SNORD51.1-201ENST00000365405 77 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 EIF4A1P1-201ENST00000420241 934 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 RPL7P57-201ENST00000423238 740 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 NRBF2P3-201ENST00000432731 865 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AL035458.1-201ENST00000433096 585 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC091685.2-201ENST00000454924 864 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AL591473.1-201ENST00000464297 313 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC063943.1-201ENST00000465434 453 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC093663.2-201ENST00000484625 313 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC104687.1-201ENST00000485829 412 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 RN7SKP46-201ENST00000515942 234 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 RNU6-362P-201ENST00000516736 90 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC004923.2-201ENST00000529649 369 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 MTND4LP24-201ENST00000572277 291 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AL512782.1-201ENST00000603093 364 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC093765.1-201ENST00000603758 881 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC010857.1-201ENST00000606398 594 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC025016.1-201ENST00000616746 682 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC091953.3-201ENST00000623220 236 ntBASIC4.78□□□□□ -1.64
HLA-DPA1P20036 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPA1P20036 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms