Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC069061.3-201ENST00000582254 823 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 MIR5096-201ENST00000583713 70 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 SNX6P1-201ENST00000601728 1224 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 BMS1P7-201ENST00000602440 1052 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AC068790.4-201ENST00000602474 263 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AC093765.1-201ENST00000603758 881 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AL133338.2-201ENST00000604292 736 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.53□□□□□ -1.68
XRCC1P18887 AC023509.5-201ENST00000617434 807 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.53□□□□□ -1.68
XRCC1P18887 AC092159.4-201ENST00000624944 550 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.53□□□□□ -1.68
XRCC1P18887 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
XRCC1P18887 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
XRCC1P18887 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 AL031119.1-201ENST00000404707 1879 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
XRCC1P18887 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
XRCC1P18887 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 AL136164.3-201ENST00000624429 3978 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AC091046.3-201ENST00000631455 1574 ntBASIC4.53□□□□□ -1.69
XRCC1P18887 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 OR56B2P-202ENST00000641377 2453 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AL592148.3-201ENST00000608771 2646 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
XRCC1P18887 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
XRCC1P18887 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
XRCC1P18887 MIR129-1-201ENST00000384972 72 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
XRCC1P18887 AL034403.1-201ENST00000399414 885 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 BTF3P9-201ENST00000418784 283 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 UQCRBP1-201ENST00000421129 336 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.52□□□□□ -1.69
XRCC1P18887 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.52□□□□□ -1.69
XRCC1P18887 YWHAZP2-201ENST00000440317 728 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 ARL2BPP10-201ENST00000446487 531 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AC009220.1-201ENST00000451614 275 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.52□□□□□ -1.69
XRCC1P18887 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.52□□□□□ -1.69
XRCC1P18887 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.52□□□□□ -1.69
XRCC1P18887 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.52□□□□□ -1.69
XRCC1P18887 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 RNA5SP446-201ENST00000515955 82 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 RNU6-491P-201ENST00000516099 110 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 RAB9BP1-201ENST00000519581 626 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.52□□□□□ -1.69
XRCC1P18887 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.52□□□□□ -1.69
XRCC1P18887 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 AC027455.1-201ENST00000574104 594 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.52□□□□□ -1.69
XRCC1P18887 AF230666.2-201ENST00000602328 725 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.52□□□□□ -1.69
XRCC1P18887 AC090953.1-201ENST00000604305 1092 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 MIR7154-201ENST00000620673 73 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AC104820.1-201ENST00000624183 307 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 AC007342.7-201ENST00000624610 2337 ntBASIC4.52□□□□□ -1.69
XRCC1P18887 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.52□□□□□ -1.69
XRCC1P18887 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 OR14L1P-202ENST00000641545 3009 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
XRCC1P18887 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
XRCC1P18887 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.51□□□□□ -1.69
XRCC1P18887 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.51□□□□□ -1.69
XRCC1P18887 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
XRCC1P18887 MIR141-201ENST00000384975 95 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
XRCC1P18887 AMZ2P2-201ENST00000406819 1057 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.51□□□□□ -1.69
XRCC1P18887 AC016397.1-201ENST00000412463 242 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 AC073136.2-201ENST00000417282 849 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 AC004690.1-201ENST00000418216 328 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 OR51A6P-201ENST00000418680 1004 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 AC009480.2-201ENST00000422916 432 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 CENPIP1-201ENST00000425713 902 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 AL445528.1-201ENST00000426330 420 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 RPL12P28-201ENST00000430852 489 ntBASIC4.51□□□□□ -1.69
XRCC1P18887 AL606490.8-201ENST00000441624 319 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms