Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.23□□□□□ -1.73
COL6A3P12111 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.23□□□□□ -1.73
COL6A3P12111 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.23□□□□□ -1.73
COL6A3P12111 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL6A3P12111 AC005726.1-201ENST00000494679 427 ntBASIC4.23□□□□□ -1.73
COL6A3P12111 AC006960.3-201ENST00000561845 705 ntBASIC4.23□□□□□ -1.73
COL6A3P12111 AC008833.1-201ENST00000611633 691 ntBASIC4.23□□□□□ -1.73
COL6A3P12111 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL6A3P12111 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
COL6A3P12111 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL6A3P12111 AL355852.1-201ENST00000454081 1771 ntBASIC4.23□□□□□ -1.73
COL6A3P12111 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.23□□□□□ -1.73
COL6A3P12111 CDY3P-201ENST00000454543 1618 ntBASIC4.23□□□□□ -1.73
COL6A3P12111 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL6A3P12111 AC008549.2-201ENST00000333482 706 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 RNU1-63P-201ENST00000383902 164 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL6A3P12111 RPS4XP4-201ENST00000443195 763 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.22□□□□□ -1.73
COL6A3P12111 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.22□□□□□ -1.73
COL6A3P12111 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.22□□□□□ -1.73
COL6A3P12111 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.22□□□□□ -1.73
COL6A3P12111 AC020914.6-201ENST00000594327 272 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 AC244258.1-201ENST00000637553 1071 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL6A3P12111 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.22□□□□□ -1.73
COL6A3P12111 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
COL6A3P12111 AC006011.1-201ENST00000442758 349 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 RPL32P34-201ENST00000486380 400 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 PRELID3BP3-201ENST00000584963 545 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.22□□□□□ -1.73
COL6A3P12111 AL391497.1-201ENST00000608671 547 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.22□□□□□ -1.73
COL6A3P12111 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.22□□□□□ -1.73
COL6A3P12111 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COL6A3P12111 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.22□□□□□ -1.73
COL6A3P12111 FAM172BP-201ENST00000487497 1089 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 ATP1B1P1-201ENST00000509767 915 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 AC007066.2-202ENST00000566531 914 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.22□□□□□ -1.73
COL6A3P12111 AL033543.1-201ENST00000623440 13454 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.22□□□□□ -1.73
COL6A3P12111 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A3P12111 AC125257.1-201ENST00000560400 2930 ntBASIC4.22□□□□□ -1.73
COL6A3P12111 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL6A3P12111 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.21□□□□□ -1.73
COL6A3P12111 COTL1P1-201ENST00000422309 375 ntBASIC4.21□□□□□ -1.74
COL6A3P12111 AL355365.1-201ENST00000616480 294 ntBASIC4.21□□□□□ -1.74
COL6A3P12111 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.21□□□□□ -1.74
COL6A3P12111 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
COL6A3P12111 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
COL6A3P12111 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.21□□□□□ -1.74
COL6A3P12111 FTH1P1-201ENST00000437933 532 ntBASIC4.21□□□□□ -1.74
COL6A3P12111 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.21□□□□□ -1.74
COL6A3P12111 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.21□□□□□ -1.74
COL6A3P12111 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.21□□□□□ -1.74
COL6A3P12111 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.21□□□□□ -1.74
COL6A3P12111 AL157762.1-201ENST00000619612 415 ntBASIC4.21□□□□□ -1.74
COL6A3P12111 AC015804.1-201ENST00000622935 435 ntBASIC4.21□□□□□ -1.74
COL6A3P12111 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.21□□□□□ -1.74
COL6A3P12111 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.21□□□□□ -1.74
COL6A3P12111 AP000473.2-201ENST00000602659 1537 ntBASIC4.21□□□□□ -1.74
COL6A3P12111 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
COL6A3P12111 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.21□□□□□ -1.74
COL6A3P12111 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A3P12111 SNORA48.8-201ENST00000391324 134 ntBASIC4.2□□□□□ -1.74
COL6A3P12111 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A3P12111 MRPS33P4-201ENST00000434892 317 ntBASIC4.2□□□□□ -1.74
COL6A3P12111 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A3P12111 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A3P12111 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.2□□□□□ -1.74
COL6A3P12111 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A3P12111 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A3P12111 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A3P12111 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A3P12111 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A3P12111 FCF1P5-201ENST00000406490 482 ntBASIC4.2□□□□□ -1.74
COL6A3P12111 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A3P12111 OR8Q1P-201ENST00000526467 655 ntBASIC4.2□□□□□ -1.74
COL6A3P12111 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms