Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
FREM3P0C091 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.85□□□□□ -1.79
FREM3P0C091 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.85□□□□□ -1.79
FREM3P0C091 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 MIR1911-201ENST00000410783 80 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.85□□□□□ -1.79
FREM3P0C091 RPL23AP38-201ENST00000423801 469 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 UBE2V1P3-201ENST00000439651 417 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 PPBPP1-201ENST00000510807 373 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AC008694.2-201ENST00000517591 306 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.85□□□□□ -1.79
FREM3P0C091 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.85□□□□□ -1.79
FREM3P0C091 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FREM3P0C091 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.85□□□□□ -1.79
FREM3P0C091 AC015922.4-201ENST00000612568 690 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 AC023509.5-201ENST00000617434 807 ntBASIC3.85□□□□□ -1.79
FREM3P0C091 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
FREM3P0C091 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 AC063923.1-201ENST00000478982 1619 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
FREM3P0C091 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 AC108032.1-201ENST00000416706 207 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 GAPDHP49-201ENST00000421421 961 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.84□□□□□ -1.79
FREM3P0C091 REREP1Y-201ENST00000422655 198 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 COX6B1P7-201ENST00000430845 235 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.84□□□□□ -1.79
FREM3P0C091 REREP2Y-201ENST00000439103 200 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.84□□□□□ -1.79
FREM3P0C091 AC009963.2-201ENST00000453431 138 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 RPL23AP81-201ENST00000455252 467 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.84□□□□□ -1.79
FREM3P0C091 NPM1P29-201ENST00000483112 803 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 RPL7P24-201ENST00000493052 752 ntBASIC3.84□□□□□ -1.79
FREM3P0C091 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.84□□□□□ -1.79
FREM3P0C091 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.84□□□□□ -1.79
FREM3P0C091 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.84□□□□□ -1.79
FREM3P0C091 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.84□□□□□ -1.79
FREM3P0C091 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FREM3P0C091 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.84□□□□□ -1.79
FREM3P0C091 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
FREM3P0C091 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.84□□□□□ -1.8
FREM3P0C091 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
FREM3P0C091 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
FREM3P0C091 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 RNA5SP479-201ENST00000364858 117 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 VN1R8P-201ENST00000407739 893 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 SETP9-201ENST00000423837 832 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AL358472.1-201ENST00000431295 329 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 RN7SL810P-201ENST00000493031 276 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 IFITM8P-201ENST00000522529 394 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 KPNA2P3-201ENST00000584190 848 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AL139041.1-201ENST00000605480 610 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
FREM3P0C091 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 OR51H2P-202ENST00000641424 3046 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FREM3P0C091 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 AC012158.1-204ENST00000483430 465 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.83□□□□□ -1.8
FREM3P0C091 IGLV3-26-201ENST00000520756 302 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.83□□□□□ -1.8
FREM3P0C091 AC027176.2-201ENST00000559166 746 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 BNIP3P5-201ENST00000562290 498 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.83□□□□□ -1.8
FREM3P0C091 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AL109618.2-201ENST00000605527 211 ntBASIC3.83□□□□□ -1.8
FREM3P0C091 AL445363.3-201ENST00000623080 671 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms