Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNA5SP439-201ENST00000617595 124 ntBASIC6.15□□□□□ -1.42
SNRPA1P09661 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SNRPA1P09661 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.15□□□□□ -1.42
SNRPA1P09661 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.15□□□□□ -1.43
SNRPA1P09661 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNRPA1P09661 AL355578.1-201ENST00000607405 1328 ntBASIC6.15□□□□□ -1.43
SNRPA1P09661 AC008432.1-201ENST00000615912 1320 ntBASIC6.15□□□□□ -1.43
SNRPA1P09661 AC092451.3-201ENST00000625067 1343 ntBASIC6.15□□□□□ -1.43
SNRPA1P09661 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNRPA1P09661 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNRPA1P09661 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.15□□□□□ -1.43
SNRPA1P09661 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SNRPA1P09661 SAMM50P1-201ENST00000455403 1399 ntBASIC6.15□□□□□ -1.43
SNRPA1P09661 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SNRPA1P09661 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
SNRPA1P09661 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNRPA1P09661 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.15□□□□□ -1.43
SNRPA1P09661 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
SNRPA1P09661 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.15□□□□□ -1.43
SNRPA1P09661 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.15□□□□□ -1.43
SNRPA1P09661 AC002525.1-201ENST00000624392 1622 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC004817.4-201ENST00000602396 3625 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNRPA1P09661 RNA5SP397-201ENST00000391323 118 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 GSTA12P-201ENST00000402398 508 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 RPL21P67-201ENST00000402896 478 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 NPM1P37-201ENST00000403105 874 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.14□□□□□ -1.43
SNRPA1P09661 GLUD1P9-201ENST00000420997 1173 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC006065.1-201ENST00000422539 802 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AL136231.1-201ENST00000429407 730 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC092162.1-201ENST00000432828 434 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 MTCYBP29-201ENST00000436327 1006 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.14□□□□□ -1.43
SNRPA1P09661 VN1R25P-201ENST00000443385 738 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 RPL21P133-201ENST00000443666 476 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AL358794.1-201ENST00000445689 381 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 RPL21P47-201ENST00000483696 477 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 TPT1P3-201ENST00000492841 512 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AC073073.1-201ENST00000493920 463 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 MTCO3P28-201ENST00000513351 515 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 RNU6-709P-201ENST00000517257 104 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 HAUS1P3-201ENST00000523909 662 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC135279.1-201ENST00000543493 504 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 CYB5AP5-201ENST00000549779 389 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC027455.1-201ENST00000574104 594 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.14□□□□□ -1.43
SNRPA1P09661 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.14□□□□□ -1.43
SNRPA1P09661 AL133370.2-201ENST00000619934 439 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 PROS2P-201ENST00000474651 1951 ntBASIC6.14□□□□□ -1.43
SNRPA1P09661 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNRPA1P09661 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNRPA1P09661 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
SNRPA1P09661 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SNRPA1P09661 ZNF90P1-201ENST00000480493 1951 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.13□□□□□ -1.43
SNRPA1P09661 RNU6-252P-201ENST00000363232 107 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 RNU6-1251P-201ENST00000364502 107 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.13□□□□□ -1.43
SNRPA1P09661 RNU6-1005P-201ENST00000384519 107 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 LIPT1P1-201ENST00000415870 1186 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.13□□□□□ -1.43
SNRPA1P09661 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AL160175.1-201ENST00000428124 247 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.13□□□□□ -1.43
SNRPA1P09661 VN1R40P-201ENST00000455196 941 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNRPA1P09661 AC113420.1-201ENST00000507903 571 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.13□□□□□ -1.43
SNRPA1P09661 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.13□□□□□ -1.43
SNRPA1P09661 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.13□□□□□ -1.43
SNRPA1P09661 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.13□□□□□ -1.43
SNRPA1P09661 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.13□□□□□ -1.43
SNRPA1P09661 AC093249.4-201ENST00000564755 259 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 RN7SL652P-201ENST00000577769 300 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 AC008088.1-201ENST00000580993 280 ntBASIC6.13□□□□□ -1.43
SNRPA1P09661 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms